Project name: 22-9.PDB

Status: done

Started: 2026-03-19 09:02:37
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Chain sequence(s) H: QVQLVESGGGLVQPGGSLRLSCAASGSISSHNDMSWYREALGNQLELVSFIASGGSTNYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCNSRTYDGEKTYWGQGTTVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-2.9815
Maximal score value
1.2064
Average score
-0.786
Total score value
-91.9592

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.5649
2 V H -1.0949
3 Q H -1.1721
4 L H 0.0000
5 V H 0.6641
6 E H 0.0000
7 S H -0.4840
8 G H -1.0340
9 G H -0.4216
11 G H 0.2617
12 L H 1.2064
13 V H -0.0883
14 Q H -1.4677
15 P H -1.8619
16 G H -1.6224
17 G H -1.0741
18 S H -1.2431
19 L H -0.8487
20 R H -1.9979
21 L H 0.0000
22 S H -0.3228
23 C H 0.0000
24 A H -0.1946
25 A H -0.6269
26 S H -0.7034
27 G H -0.8216
28 S H -0.8988
29 I H 0.0000
30 S H -1.4948
35 S H -1.2030
36 H H -1.2849
37 N H -0.8772
38 D H -0.7694
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 Y H 0.5163
43 R H 0.0000
44 E H -0.8268
45 A H -0.6501
46 L H 0.4768
47 G H -0.6630
48 N H -1.7289
49 Q H -1.6406
50 L H -0.3338
51 E H -0.5405
52 L H 0.3982
53 V H 0.0000
54 S H 0.0000
55 F H -0.0246
56 I H 0.0000
57 A H -0.9888
58 S H -1.2691
59 G H -1.0768
63 G H -0.9748
64 S H -0.8399
65 T H -0.8476
66 N H -1.4989
67 Y H -1.2703
68 A H -1.3462
69 D H -2.6138
70 S H -1.7878
71 V H 0.0000
72 K H -2.7844
74 G H -1.7441
75 R H -1.7397
76 F H 0.0000
77 T H -0.8707
78 I H 0.0000
79 S H -0.4355
80 R H -1.2411
81 D H -1.9590
82 N H -2.4989
83 S H -1.9525
84 K H -2.5885
85 N H -2.0884
86 T H -1.1472
87 L H 0.0000
88 Y H -0.3120
89 L H 0.0000
90 Q H -1.0471
91 M H 0.0000
92 N H -1.4171
93 S H -1.4290
94 L H 0.0000
95 R H -2.9815
96 A H -2.0128
97 E H -2.3045
98 D H 0.0000
99 T H -0.5488
100 A H 0.0000
101 V H 0.3452
102 Y H 0.0000
103 Y H 0.3844
104 C H 0.0000
105 N H 0.0000
106 S H 0.0000
107 R H -1.1906
108 T H -1.1892
109 Y H -0.9259
110 D H -2.1080
113 G H -2.2036
114 E H -2.7348
115 K H -2.3460
116 T H -0.8610
117 Y H -0.4912
118 W H 0.2492
119 G H -0.1197
120 Q H -0.8878
121 G H -0.2788
122 T H -0.1879
123 T H -0.0384
124 V H 0.0000
125 T H -0.0685
126 V H 0.0000
127 S H -0.8796
128 S H -0.7524
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Laboratory of Theory of Biopolymers 2018