Project name: dc28

Status: done

Started: 2025-06-25 14:00:17
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Chain sequence(s) H: DVQLQESGGGSVQAGGSLRLSCEASGNTYCVGWFRQGPGKEREGVAAIARLTGRALYDDSVKGRFTISQDNAKNTLYLQMNDLKPEDTAMYYCAADRCPAGTWLRADEYKYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:09)
Show buried residues

Minimal score value
-3.2252
Maximal score value
1.0143
Average score
-0.9784
Total score value
-119.3626

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.2726
2 V H 0.0000
3 Q H -2.1252
4 L H 0.0000
5 Q H -1.9538
6 E H 0.0000
7 S H -1.0430
8 G H -0.9782
9 G H -0.8612
11 G H -0.6472
12 S H -0.5353
13 V H -0.6330
14 Q H -1.6679
15 A H -1.7796
16 G H -1.8536
17 G H -1.4155
18 S H -1.3382
19 L H -0.9023
20 R H -1.3920
21 L H 0.0000
22 S H -0.9040
23 C H 0.0000
24 E H -2.2233
25 A H 0.0000
26 S H -1.8685
27 G H -1.7129
28 N H -1.7521
29 T H 0.0000
37 Y H -0.1540
38 C H 0.0000
39 V H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.6985
45 G H -1.7615
46 P H -1.3063
47 G H -1.9242
48 K H -3.1570
49 E H -3.2252
50 R H -2.6020
51 E H -1.7705
52 G H -0.8800
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 I H 0.0000
57 A H 0.0000
58 R H -0.0781
59 L H 1.0143
62 T H -0.0872
63 G H -0.8254
64 R H -1.6443
65 A H -0.6806
66 L H -0.2554
67 Y H -0.7116
68 D H -1.7396
69 D H -2.7381
70 S H -2.0042
71 V H 0.0000
72 K H -2.7365
74 G H -2.0337
75 R H -2.1607
76 F H 0.0000
77 T H -0.6687
78 I H 0.0000
79 S H -0.6774
80 Q H -1.2153
81 D H -1.7541
82 N H -2.1737
83 A H -1.5506
84 K H -2.4778
85 N H -2.3126
86 T H -1.6092
87 L H 0.0000
88 Y H -0.5261
89 L H 0.0000
90 Q H -0.8525
91 M H 0.0000
92 N H -1.9819
93 D H -2.7125
94 L H 0.0000
95 K H -2.2847
96 P H -1.6351
97 E H -2.1658
98 D H 0.0000
99 T H -0.9160
100 A H 0.0000
101 M H -0.3517
102 Y H 0.0000
103 Y H -0.4184
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 D H 0.0000
108 R H -1.6862
109 C H -0.6246
110 P H -0.5464
111 A H -0.6227
111A G H -0.3405
111B T H -0.4529
112C W H 0.0356
112B L H -0.7308
112A R H -2.3734
112 A H -2.3824
113 D H -2.8094
114 E H -1.9230
115 Y H 0.0000
116 K H -2.2266
117 Y H -1.1462
118 W H -0.6231
119 G H -1.0015
120 Q H -1.5049
121 G H -0.8927
122 T H -0.8221
123 Q H -0.7412
124 V H 0.0000
125 T H -0.7591
126 V H 0.0000
127 S H -1.0855
128 S H -0.7992
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Laboratory of Theory of Biopolymers 2018