| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFFIYYIESYPAGEAIVLTVPGSCRSYDLTGLKPGTEYWVGIDGVKGGRWSTPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8193 | |
| 2 | L | A | 0.2524 | |
| 3 | P | A | -0.0598 | |
| 4 | A | A | -0.3675 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -2.1377 | |
| 7 | N | A | -1.5595 | |
| 8 | L | A | -0.2332 | |
| 9 | V | A | 1.0935 | |
| 10 | V | A | 0.6050 | |
| 11 | S | A | -0.6467 | |
| 12 | R | A | -2.0343 | |
| 13 | V | A | -1.0820 | |
| 14 | T | A | -1.8274 | |
| 15 | E | A | -3.1062 | |
| 16 | D | A | -2.8357 | |
| 17 | S | A | -2.1459 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.2571 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.2976 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2420 | |
| 24 | A | A | 0.0000 | |
| 25 | P | A | -1.3919 | |
| 26 | D | A | -2.1468 | |
| 27 | A | A | -1.4221 | |
| 28 | A | A | -1.1764 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5977 | |
| 31 | S | A | -1.0272 | |
| 32 | F | A | 0.0000 | |
| 33 | F | A | 0.9977 | |
| 34 | I | A | 0.0000 | |
| 35 | Y | A | 1.2127 | |
| 36 | Y | A | 0.8462 | |
| 37 | I | A | 0.0000 | |
| 38 | E | A | -1.6023 | |
| 39 | S | A | -0.5754 | |
| 40 | Y | A | 0.5861 | |
| 41 | P | A | 0.0768 | |
| 42 | A | A | -0.3120 | |
| 43 | G | A | -1.0940 | |
| 44 | E | A | -1.5740 | |
| 45 | A | A | 0.0041 | |
| 46 | I | A | 1.1013 | |
| 47 | V | A | 2.2298 | |
| 48 | L | A | 1.5291 | |
| 49 | T | A | 0.6174 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -0.7165 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.0548 | |
| 54 | C | A | -0.5563 | |
| 55 | R | A | -0.6226 | |
| 56 | S | A | -0.3391 | |
| 57 | Y | A | -0.5394 | |
| 58 | D | A | -1.7339 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3915 | |
| 61 | G | A | -1.5246 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -3.1998 | |
| 64 | P | A | -2.6109 | |
| 65 | G | A | -1.9704 | |
| 66 | T | A | -2.2385 | |
| 67 | E | A | -1.6576 | |
| 68 | Y | A | 0.0000 | |
| 69 | W | A | 0.7084 | |
| 70 | V | A | 0.0000 | |
| 71 | G | A | 0.0000 | |
| 72 | I | A | 0.0000 | |
| 73 | D | A | 0.0000 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -0.9901 | |
| 76 | K | A | -1.8946 | |
| 77 | G | A | -1.7846 | |
| 78 | G | A | -1.7562 | |
| 79 | R | A | -1.8099 | |
| 80 | W | A | -0.0498 | |
| 81 | S | A | 0.0000 | |
| 82 | T | A | 0.1628 | |
| 83 | P | A | -0.0880 | |
| 84 | L | A | -0.3450 | |
| 85 | S | A | 0.5576 | |
| 86 | A | A | 1.3052 | |
| 87 | I | A | 2.0567 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -1.0163 | |
| 90 | T | A | -2.0216 |