| Chain sequence(s) |
A: GGGHKGG
C: GGGHKGG B: GGGHKGG E: GGGHKGG D: GGGHKGG G: GGGHKGG F: GGGHKGG I: GGGHKGG H: GGGHKGG K: GGGHKGG J: GGGHKGG M: GGGHKGG L: GGGHKGG O: GGGHKGG N: GGGHKGG Q: GGGHKGG P: GGGHKGG S: GGGHKGG R: GGGHKGG T: GGGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:32)
[INFO] Main: Simulation completed successfully. (00:05:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.2228 | |
| 2 | G | A | -1.4195 | |
| 3 | G | A | -1.8017 | |
| 4 | H | A | -2.2681 | |
| 5 | K | A | -2.5027 | |
| 6 | G | A | -1.8806 | |
| 7 | G | A | -1.3745 | |
| 1 | G | B | -1.2115 | |
| 2 | G | B | -1.4677 | |
| 3 | G | B | -1.8968 | |
| 4 | H | B | -2.3902 | |
| 5 | K | B | -2.6792 | |
| 6 | G | B | -2.0608 | |
| 7 | G | B | -1.3992 | |
| 1 | G | C | -1.2732 | |
| 2 | G | C | -1.7438 | |
| 3 | G | C | -2.3643 | |
| 4 | H | C | -2.4924 | |
| 5 | K | C | -2.6933 | |
| 6 | G | C | -2.0257 | |
| 7 | G | C | -1.4650 | |
| 1 | G | D | -1.1484 | |
| 2 | G | D | -1.4566 | |
| 3 | G | D | -2.2679 | |
| 4 | H | D | -2.6378 | |
| 5 | K | D | -3.0342 | |
| 6 | G | D | -1.8315 | |
| 7 | G | D | -1.2545 | |
| 1 | G | E | -1.1986 | |
| 2 | G | E | -1.5102 | |
| 3 | G | E | -2.3726 | |
| 4 | H | E | -2.6271 | |
| 5 | K | E | -3.0316 | |
| 6 | G | E | -1.8505 | |
| 7 | G | E | -1.2526 | |
| 1 | G | F | -1.4150 | |
| 2 | G | F | -1.7499 | |
| 3 | G | F | -2.1937 | |
| 4 | H | F | -2.2920 | |
| 5 | K | F | -2.3100 | |
| 6 | G | F | -1.8539 | |
| 7 | G | F | -1.3741 | |
| 1 | G | G | -1.3931 | |
| 2 | G | G | -1.6264 | |
| 3 | G | G | -1.8510 | |
| 4 | H | G | -1.6906 | |
| 5 | K | G | -1.6831 | |
| 6 | G | G | -1.5422 | |
| 7 | G | G | -1.2061 | |
| 1 | G | H | -1.3520 | |
| 2 | G | H | -1.5463 | |
| 3 | G | H | -1.6188 | |
| 4 | H | H | -1.5446 | |
| 5 | K | H | -1.5015 | |
| 6 | G | H | -1.3372 | |
| 7 | G | H | -1.1937 | |
| 1 | G | I | -1.3153 | |
| 2 | G | I | -1.4604 | |
| 3 | G | I | -1.5061 | |
| 4 | H | I | -1.5386 | |
| 5 | K | I | -1.4917 | |
| 6 | G | I | -1.3386 | |
| 7 | G | I | -1.1900 | |
| 1 | G | J | -1.3651 | |
| 2 | G | J | -1.5658 | |
| 3 | G | J | -1.7308 | |
| 4 | H | J | -1.6149 | |
| 5 | K | J | -1.5533 | |
| 6 | G | J | -1.3389 | |
| 7 | G | J | -1.1849 | |
| 1 | G | K | -1.3940 | |
| 2 | G | K | -1.6335 | |
| 3 | G | K | -1.8207 | |
| 4 | H | K | -1.7365 | |
| 5 | K | K | -1.6068 | |
| 6 | G | K | -1.4137 | |
| 7 | G | K | -1.2230 | |
| 1 | G | L | -1.3576 | |
| 2 | G | L | -1.6483 | |
| 3 | G | L | -1.8248 | |
| 4 | H | L | -1.9410 | |
| 5 | K | L | -2.0761 | |
| 6 | G | L | -1.5895 | |
| 7 | G | L | -1.2961 | |
| 1 | G | M | -1.2491 | |
| 2 | G | M | -1.6784 | |
| 3 | G | M | -2.3542 | |
| 4 | H | M | -2.7251 | |
| 5 | K | M | -2.6881 | |
| 6 | G | M | -2.2093 | |
| 7 | G | M | -1.5326 | |
| 1 | G | N | -1.0576 | |
| 2 | G | N | -1.5394 | |
| 3 | G | N | -2.0268 | |
| 4 | H | N | -2.7136 | |
| 5 | K | N | -3.2139 | |
| 6 | G | N | -2.3721 | |
| 7 | G | N | -1.3642 | |
| 1 | G | O | -1.2050 | |
| 2 | G | O | -1.6180 | |
| 3 | G | O | -2.0470 | |
| 4 | H | O | -2.0698 | |
| 5 | K | O | -2.0848 | |
| 6 | G | O | -1.7815 | |
| 7 | G | O | -1.1526 | |
| 1 | G | P | -1.2682 | |
| 2 | G | P | -1.5192 | |
| 3 | G | P | -1.8290 | |
| 4 | H | P | -2.1415 | |
| 5 | K | P | -2.4294 | |
| 6 | G | P | -1.9269 | |
| 7 | G | P | -1.3649 | |
| 1 | G | Q | -1.2892 | |
| 2 | G | Q | -1.4872 | |
| 3 | G | Q | -1.8344 | |
| 4 | H | Q | -2.1226 | |
| 5 | K | Q | -2.2598 | |
| 6 | G | Q | -1.8442 | |
| 7 | G | Q | -1.4038 | |
| 1 | G | R | -1.2239 | |
| 2 | G | R | -1.3771 | |
| 3 | G | R | -1.7584 | |
| 4 | H | R | -2.3351 | |
| 5 | K | R | -2.6424 | |
| 6 | G | R | -1.8974 | |
| 7 | G | R | -1.3786 | |
| 1 | G | S | -1.2203 | |
| 2 | G | S | -1.3446 | |
| 3 | G | S | -1.5704 | |
| 4 | H | S | -1.8549 | |
| 5 | K | S | -2.1185 | |
| 6 | G | S | -1.7287 | |
| 7 | G | S | -1.3516 | |
| 1 | G | T | -1.2324 | |
| 2 | G | T | -1.3477 | |
| 3 | G | T | -1.5240 | |
| 4 | H | T | -1.8084 | |
| 5 | K | T | -1.9652 | |
| 6 | G | T | -1.6340 | |
| 7 | G | T | -1.2951 |