Chain sequence(s) |
A: NWKKILRR
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | NA1A |
Energy difference between WT (input) and mutated protein (by FoldX) | -0.0804269 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:09) [INFO] FoldX: Starting FoldX energy minimalization (00:00:18) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24) [INFO] Main: Simulation completed successfully. (00:00:24) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.1151 | mutated: NA1A |
2 | W | A | 0.5188 | |
3 | K | A | -1.6279 | |
4 | K | A | -1.7490 | |
5 | I | A | 0.4382 | |
6 | L | A | -0.2586 | |
7 | R | A | -2.4092 | |
8 | R | A | -2.3444 |