Project name: 9be7b7144d97e97 [mutate: NA1A]

Status: done

Started: 2025-02-28 10:05:56
Settings
Chain sequence(s) A: NWKKILRR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues NA1A
Energy difference between WT (input) and mutated protein (by FoldX) -0.0804269 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:18)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.4092
Maximal score value
0.5188
Average score
-0.9146
Total score value
-7.317

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.1151 mutated: NA1A
2 W A 0.5188
3 K A -1.6279
4 K A -1.7490
5 I A 0.4382
6 L A -0.2586
7 R A -2.4092
8 R A -2.3444
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Laboratory of Theory of Biopolymers 2018