Project name: 4ca40064181e33d

Status: done

Started: 2025-02-18 15:25:03
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Chain sequence(s) A: LKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGLPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:13)
Show buried residues

Minimal score value
-4.1933
Maximal score value
1.6124
Average score
-1.2875
Total score value
-222.7387

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
8 L A -0.4353
9 K A -1.9918
10 P A -2.2006
11 E A -2.7467
12 V A -1.6169
13 V A -2.4513
14 E A -3.5561
15 E A -3.5673
16 L A 0.0000
17 T A -3.0747
18 R A -3.4288
19 K A -2.9456
20 T A -1.3776
21 Y A -0.1350
22 F A 0.0000
23 T A -2.0432
24 E A -3.6786
25 K A -3.2258
26 E A -2.2921
27 V A 0.0000
28 Q A -2.3073
29 Q A -2.4735
30 W A -0.9273
31 Y A -0.9782
32 K A -1.9829
33 G A -1.6684
34 F A 0.0000
35 I A -1.2425
36 K A -2.6097
37 D A -2.6333
38 C A -1.8365
39 P A -1.3266
40 S A -1.1073
41 G A -1.3747
42 Q A -1.8074
43 L A -1.5993
44 D A -1.8023
45 A A -0.9955
46 A A -0.5250
47 G A -0.9276
48 F A 0.0000
49 Q A -1.2020
50 K A -1.1928
51 I A -0.0562
52 Y A -0.2530
53 K A -0.9857
54 Q A -0.4454
55 F A 1.6124
56 F A 0.9618
57 P A 0.3440
58 F A 1.4175
59 G A -0.2396
60 D A -1.6079
61 P A 0.0000
62 T A -1.0060
63 K A -0.9516
64 F A -0.4546
65 A A 0.0000
66 T A -0.2215
67 F A 0.0154
68 V A 0.0000
69 F A 0.0000
70 N A -1.8663
71 V A 0.0000
72 F A -1.2630
73 D A 0.0000
74 E A -3.6774
75 N A -3.9327
76 K A -4.1933
77 D A -3.9807
78 G A -3.0988
79 R A -3.4925
80 I A 0.0000
81 E A -2.3597
82 F A 0.0000
83 S A -0.7678
84 E A -1.1979
85 F A -0.2480
86 I A 0.0000
87 Q A -0.4896
88 A A 0.0000
89 L A 0.2357
90 S A 0.0000
91 V A -0.3762
92 T A -0.2861
93 S A -0.5059
94 R A -0.8855
95 G A -0.7908
96 T A -0.8685
97 L A -0.7016
98 D A -1.9947
99 E A -1.7467
100 K A -1.3857
101 L A 0.0000
102 R A -2.5284
103 W A -1.3273
104 A A -0.9959
105 F A 0.0000
106 K A -1.9143
107 L A 0.0000
108 Y A -0.4674
109 D A 0.0000
110 L A -1.2535
111 D A -2.5807
112 N A -2.7749
113 D A -2.5221
114 G A -1.3968
115 Y A -0.7956
116 I A 0.0000
117 T A -2.0582
118 R A -3.3261
119 N A -2.5776
120 E A -1.6858
121 M A 0.0000
122 L A -2.0231
123 D A -1.6272
124 I A 0.0000
125 V A 0.0000
126 D A -1.1540
127 A A 0.0000
128 I A -0.0816
129 Y A -0.3311
130 Q A -0.8818
131 M A 0.0000
132 V A 0.5617
133 G A 0.0665
138 L A 0.3066
139 P A -1.2422
140 E A -2.8619
141 E A -3.4621
142 E A -3.1810
143 N A -2.1070
144 T A -1.9454
145 P A -2.2643
146 E A -3.7494
147 K A -3.9174
148 R A -3.3759
149 V A 0.0000
150 D A -3.8091
151 R A -3.4797
152 I A -1.7976
153 F A 0.0000
154 A A -1.2466
155 M A -0.9171
156 M A 0.0000
157 D A -2.2297
158 K A -2.7473
159 N A -2.7935
160 A A -2.1729
161 D A -2.9127
162 G A -2.3084
163 K A -2.1814
164 L A 0.0000
165 T A -0.8558
166 L A -1.1123
167 Q A -1.9963
168 E A -1.9634
169 F A 0.0000
170 Q A -2.2253
171 E A -2.6803
172 G A 0.0000
173 S A 0.0000
174 K A -1.7384
175 A A -1.0037
176 D A -0.9726
177 P A -0.6945
178 S A -0.5802
179 I A -0.0742
180 V A -0.1954
181 Q A -1.0170
182 A A -0.1579
183 L A -0.0279
184 S A -0.3407
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Laboratory of Theory of Biopolymers 2018