| Chain sequence(s) |
A: IVIVKGHE
C: IVIVKGHE B: IVIVKGHE E: IVIVKGHE D: IVIVKGHE G: IVIVKGHE F: IVIVKGHE I: IVIVKGHE H: IVIVKGHE K: IVIVKGHEIVIVKGHE J: IVIVKGHE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:44)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 4.5072 | |
| 2 | V | A | 3.2992 | |
| 3 | I | A | 1.7948 | |
| 4 | V | A | -0.1767 | |
| 5 | K | A | -2.6917 | |
| 6 | G | A | -2.9034 | |
| 7 | H | A | -3.5218 | |
| 8 | E | A | -3.2007 | |
| 1 | I | B | 3.7636 | |
| 2 | V | B | 3.2642 | |
| 3 | I | B | 1.7433 | |
| 4 | V | B | 0.1594 | |
| 5 | K | B | -2.1992 | |
| 6 | G | B | -3.0646 | |
| 7 | H | B | -3.4619 | |
| 8 | E | B | -3.5532 | |
| 1 | I | C | 4.3770 | |
| 2 | V | C | 0.0000 | |
| 3 | I | C | 1.7763 | |
| 4 | V | C | 0.1439 | |
| 5 | K | C | -1.8010 | |
| 6 | G | C | -2.9795 | |
| 7 | H | C | -3.3370 | |
| 8 | E | C | -3.3053 | |
| 1 | I | D | 4.5241 | |
| 2 | V | D | 0.0000 | |
| 3 | I | D | 2.1522 | |
| 4 | V | D | 0.3251 | |
| 5 | K | D | -2.0388 | |
| 6 | G | D | -2.6689 | |
| 7 | H | D | -3.0900 | |
| 8 | E | D | -3.2178 | |
| 1 | I | E | 4.6012 | |
| 2 | V | E | 4.0961 | |
| 3 | I | E | 2.9084 | |
| 4 | V | E | 0.7881 | |
| 5 | K | E | -1.8918 | |
| 6 | G | E | -2.6359 | |
| 7 | H | E | -3.1226 | |
| 8 | E | E | -3.1308 | |
| 1 | I | F | 4.7257 | |
| 2 | V | F | 0.0000 | |
| 3 | I | F | 3.3745 | |
| 4 | V | F | 0.8128 | |
| 5 | K | F | -1.8205 | |
| 6 | G | F | -2.5145 | |
| 7 | H | F | -3.0317 | |
| 8 | E | F | -3.0799 | |
| 1 | I | G | 4.2949 | |
| 2 | V | G | 3.9762 | |
| 3 | I | G | 2.8457 | |
| 4 | V | G | 0.5349 | |
| 5 | K | G | -2.0004 | |
| 6 | G | G | -2.6244 | |
| 7 | H | G | -3.1015 | |
| 8 | E | G | -3.0686 | |
| 1 | I | H | 4.2140 | |
| 2 | V | H | 3.7403 | |
| 3 | I | H | 2.1261 | |
| 4 | V | H | 0.2399 | |
| 5 | K | H | -2.3093 | |
| 6 | G | H | -2.9797 | |
| 7 | H | H | -4.1146 | |
| 8 | E | H | -3.7154 | |
| 1 | I | I | 4.3061 | |
| 2 | V | I | 3.7246 | |
| 3 | I | I | 2.8837 | |
| 4 | V | I | 0.0000 | |
| 5 | K | I | -2.0792 | |
| 6 | G | I | -3.1319 | |
| 7 | H | I | -4.0557 | |
| 8 | E | I | -4.3748 | |
| 1 | I | J | 4.3831 | |
| 2 | V | J | 4.1958 | |
| 3 | I | J | 3.2836 | |
| 4 | V | J | 0.8652 | |
| 5 | K | J | -1.5531 | |
| 6 | G | J | -2.1485 | |
| 7 | H | J | -2.2053 | |
| 8 | E | J | -2.8546 | |
| 1 | I | K | 4.1154 | |
| 2 | V | K | 3.9753 | |
| 3 | I | K | 2.3262 | |
| 4 | V | K | 0.0000 | |
| 5 | K | K | -2.1681 | |
| 6 | G | K | -2.0391 | |
| 7 | H | K | -2.5563 | |
| 8 | E | K | -1.9234 | |
| 9 | I | K | 0.0850 | |
| 10 | V | K | 0.0852 | |
| 11 | I | K | -0.8083 | |
| 12 | V | K | -0.2606 | |
| 13 | K | K | -3.1372 | |
| 14 | G | K | -3.3146 | |
| 15 | H | K | -3.4337 | |
| 16 | E | K | -4.0842 |