Project name: IVIVKGHE12

Status: done

Started: 2026-02-13 10:18:49
Settings
Chain sequence(s) A: IVIVKGHE
C: IVIVKGHE
B: IVIVKGHE
E: IVIVKGHE
D: IVIVKGHE
G: IVIVKGHE
F: IVIVKGHE
I: IVIVKGHE
H: IVIVKGHE
K: IVIVKGHEIVIVKGHE
J: IVIVKGHE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:47)
Show buried residues

Minimal score value
-4.3748
Maximal score value
4.7257
Average score
-0.3036
Total score value
-29.1434

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 4.5072
2 V A 3.2992
3 I A 1.7948
4 V A -0.1767
5 K A -2.6917
6 G A -2.9034
7 H A -3.5218
8 E A -3.2007
1 I B 3.7636
2 V B 3.2642
3 I B 1.7433
4 V B 0.1594
5 K B -2.1992
6 G B -3.0646
7 H B -3.4619
8 E B -3.5532
1 I C 4.3770
2 V C 0.0000
3 I C 1.7763
4 V C 0.1439
5 K C -1.8010
6 G C -2.9795
7 H C -3.3370
8 E C -3.3053
1 I D 4.5241
2 V D 0.0000
3 I D 2.1522
4 V D 0.3251
5 K D -2.0388
6 G D -2.6689
7 H D -3.0900
8 E D -3.2178
1 I E 4.6012
2 V E 4.0961
3 I E 2.9084
4 V E 0.7881
5 K E -1.8918
6 G E -2.6359
7 H E -3.1226
8 E E -3.1308
1 I F 4.7257
2 V F 0.0000
3 I F 3.3745
4 V F 0.8128
5 K F -1.8205
6 G F -2.5145
7 H F -3.0317
8 E F -3.0799
1 I G 4.2949
2 V G 3.9762
3 I G 2.8457
4 V G 0.5349
5 K G -2.0004
6 G G -2.6244
7 H G -3.1015
8 E G -3.0686
1 I H 4.2140
2 V H 3.7403
3 I H 2.1261
4 V H 0.2399
5 K H -2.3093
6 G H -2.9797
7 H H -4.1146
8 E H -3.7154
1 I I 4.3061
2 V I 3.7246
3 I I 2.8837
4 V I 0.0000
5 K I -2.0792
6 G I -3.1319
7 H I -4.0557
8 E I -4.3748
1 I J 4.3831
2 V J 4.1958
3 I J 3.2836
4 V J 0.8652
5 K J -1.5531
6 G J -2.1485
7 H J -2.2053
8 E J -2.8546
1 I K 4.1154
2 V K 3.9753
3 I K 2.3262
4 V K 0.0000
5 K K -2.1681
6 G K -2.0391
7 H K -2.5563
8 E K -1.9234
9 I K 0.0850
10 V K 0.0852
11 I K -0.8083
12 V K -0.2606
13 K K -3.1372
14 G K -3.3146
15 H K -3.4337
16 E K -4.0842
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Laboratory of Theory of Biopolymers 2018