| Chain sequence(s) |
A: GILSSFKGVAKGVAKDLAGKLLETLKCKITGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 1.1645 | |
| 2 | I | A | 2.6640 | |
| 3 | L | A | 2.5887 | |
| 4 | S | A | 1.2366 | |
| 5 | S | A | 1.4620 | |
| 6 | F | A | 2.1951 | |
| 7 | K | A | -0.3277 | |
| 8 | G | A | 0.1701 | |
| 9 | V | A | 1.2365 | |
| 10 | A | A | 0.3999 | |
| 11 | K | A | -1.6891 | |
| 12 | G | A | -1.1519 | |
| 13 | V | A | -0.4416 | |
| 14 | A | A | -1.0210 | |
| 15 | K | A | -2.5124 | |
| 16 | D | A | -2.3524 | |
| 17 | L | A | -0.7365 | |
| 18 | A | A | -0.8110 | |
| 19 | G | A | -1.6646 | |
| 20 | K | A | -1.7119 | |
| 21 | L | A | 0.3650 | |
| 22 | L | A | -0.3906 | |
| 23 | E | A | -1.8531 | |
| 24 | T | A | -0.6284 | |
| 25 | L | A | 0.0480 | |
| 26 | K | A | -0.9553 | |
| 27 | C | A | -1.0182 | |
| 28 | K | A | -0.9856 | |
| 29 | I | A | 0.8878 | |
| 30 | T | A | 0.1591 | |
| 31 | G | A | -0.3090 | |
| 32 | C | A | -0.6335 |