| Chain sequence(s) |
H: EVQLVESGGGLVQPKGSLKLSCAASGFTFNSYAMHWVRQAPGKGLEWIARIRSKSSNYVTYYADSVRDRFTISRDDSQSMLYLQVSNLKTEDTAMYYCVRDPDYYGTDWYFDVWGTGTTVTVSS
L: SIVMTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQYSSYPLTFGAGTKLELK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8575 | |
| 2 | V | H | -0.7158 | |
| 3 | Q | H | -0.7049 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0761 | |
| 6 | E | H | 0.3234 | |
| 7 | S | H | -0.3212 | |
| 8 | G | H | -0.8271 | |
| 9 | G | H | -0.3338 | |
| 11 | G | H | 0.4071 | |
| 12 | L | H | 1.1915 | |
| 13 | V | H | -0.1784 | |
| 14 | Q | H | -1.7020 | |
| 15 | P | H | -2.3031 | |
| 16 | K | H | -3.0053 | |
| 17 | G | H | -1.9386 | |
| 18 | S | H | -1.4664 | |
| 19 | L | H | -0.6553 | |
| 20 | K | H | -1.2049 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1914 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0921 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.6817 | |
| 27 | G | H | -0.9785 | |
| 28 | F | H | -0.4176 | |
| 29 | T | H | -0.3333 | |
| 30 | F | H | 0.0000 | |
| 35 | N | H | -1.8164 | |
| 36 | S | H | -1.0260 | |
| 37 | Y | H | -0.6648 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | A | H | -1.1626 | |
| 46 | P | H | -0.9720 | |
| 47 | G | H | -1.4252 | |
| 48 | K | H | -2.1215 | |
| 49 | G | H | -1.2787 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8566 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.2511 | |
| 58 | S | H | 0.0000 | |
| 59 | K | H | -2.5415 | |
| 60 | S | H | -1.5801 | |
| 61 | S | H | -1.2745 | |
| 62 | N | H | -1.7372 | |
| 63 | Y | H | -0.8167 | |
| 64 | V | H | -0.0408 | |
| 65 | T | H | 0.2267 | |
| 66 | Y | H | 0.2589 | |
| 67 | Y | H | -0.6539 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.3777 | |
| 70 | S | H | -1.7732 | |
| 71 | V | H | 0.0000 | |
| 72 | R | H | -2.4281 | |
| 74 | D | H | -2.7961 | |
| 75 | R | H | -1.9083 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8129 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1515 | |
| 80 | R | H | 0.0000 | |
| 81 | D | H | -1.2562 | |
| 82 | D | H | -1.5847 | |
| 83 | S | H | -1.2000 | |
| 84 | Q | H | -1.6124 | |
| 85 | S | H | -1.0569 | |
| 86 | M | H | -0.4815 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.2727 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9163 | |
| 91 | V | H | 0.0000 | |
| 92 | S | H | -1.8642 | |
| 93 | N | H | -2.8645 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.7481 | |
| 96 | T | H | -1.9258 | |
| 97 | E | H | -2.2793 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6714 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | 0.1136 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | D | H | 0.0000 | |
| 108 | P | H | 0.0684 | |
| 109 | D | H | -0.1966 | |
| 110 | Y | H | 0.7992 | |
| 111 | Y | H | 1.2727 | |
| 111A | G | H | 0.4544 | |
| 112A | T | H | 0.4519 | |
| 112 | D | H | 0.0000 | |
| 113 | W | H | 0.3925 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.1335 | |
| 117 | V | H | 0.0604 | |
| 118 | W | H | 0.1086 | |
| 119 | G | H | 0.0000 | |
| 120 | T | H | -0.1616 | |
| 121 | G | H | -0.0573 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0222 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0586 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6402 | |
| 128 | S | H | -0.4758 | |
| 1 | S | L | 0.0873 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 1.2794 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.3895 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -1.0606 | |
| 8 | H | L | -1.3144 | |
| 9 | K | L | -1.4109 | |
| 10 | F | L | 0.3749 | |
| 11 | M | L | -0.1222 | |
| 12 | S | L | -0.4662 | |
| 13 | T | L | 0.0000 | |
| 14 | S | L | -0.6430 | |
| 15 | V | L | 0.2723 | |
| 16 | G | L | -0.9943 | |
| 17 | D | L | -1.7006 | |
| 18 | R | L | -2.4407 | |
| 19 | V | L | 0.0000 | |
| 20 | S | L | -0.5675 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8453 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.8891 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -0.9134 | |
| 27 | Q | L | -2.0207 | |
| 28 | D | L | -2.8200 | |
| 29 | V | L | 0.0000 | |
| 36 | G | L | -1.3140 | |
| 37 | T | L | -0.6645 | |
| 38 | A | L | 0.0000 | |
| 39 | V | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.6187 | |
| 46 | P | L | -1.1383 | |
| 47 | G | L | -1.3077 | |
| 48 | Q | L | -1.8327 | |
| 49 | S | L | -1.0202 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0919 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0595 | |
| 56 | W | L | 0.1826 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.4208 | |
| 66 | T | L | -0.4961 | |
| 67 | R | L | -1.3641 | |
| 68 | H | L | -0.8188 | |
| 69 | T | L | -0.5956 | |
| 70 | G | L | -0.8443 | |
| 71 | V | L | -0.9847 | |
| 72 | P | L | -1.3229 | |
| 74 | D | L | -2.3125 | |
| 75 | R | L | -1.7815 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.7845 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.5802 | |
| 80 | G | L | -1.0139 | |
| 83 | S | L | -1.3024 | |
| 84 | G | L | -1.8409 | |
| 85 | T | L | -2.1956 | |
| 86 | D | L | -2.4300 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6664 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.9640 | |
| 93 | N | L | -2.1603 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -0.8150 | |
| 96 | S | L | -0.8113 | |
| 97 | E | L | -1.7736 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.7734 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.9716 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | S | L | -0.4097 | |
| 109 | S | L | 0.1080 | |
| 114 | Y | L | 0.5937 | |
| 115 | P | L | -0.0348 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | 0.2768 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | A | L | -0.7544 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6979 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9721 | |
| 126 | L | L | -0.5009 | |
| 127 | K | L | -1.4481 |