| Chain sequence(s) |
A: GPLPLNPEPALKSTDEYVTPTDLLYIAETDLITETGHPTADIVVDGKVLIPKVSATDFKVFLLKLPDPNKLPLPSPDFIDRSTEILIWRLKAFKIHVGGPLGKGTYGHANFNALGNVDNPTTYQHETADDTVNLSYTPILKQEYIIGDEPPLGKYTTIAAPNPGLPPGAEPPTTVESTIIEHGDKADIGFGAKDFAKLEPEKNNVPDNILNTKTLEIDYEAMKAEPYGRRMFTYDKYEKSKNVKNYVRDGPVLNPLPDSLPPSPLYTKPPPTSPFATRPSYDYFSLPDAGEISEKDLIFNKPIFLEKTPGLNNGVLWYNRLYITVLDNTRSTIETITTRISTPATDVYDASNYVTSKRYTEQYKLSLILQLCKIPLTPETLEELARLDPRILVNANLPFIPKVERPDPYAGKKFKEIDLTDKLSSNLSETDLGRAYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2324 | |
| 2 | P | A | 0.4535 | |
| 3 | L | A | 1.3599 | |
| 4 | P | A | 0.3889 | |
| 5 | L | A | 0.9208 | |
| 6 | N | A | -1.0515 | |
| 7 | P | A | -1.2945 | |
| 8 | E | A | -2.1806 | |
| 9 | P | A | -1.3119 | |
| 10 | A | A | -0.4706 | |
| 11 | L | A | -0.1631 | |
| 12 | K | A | -1.2408 | |
| 13 | S | A | -1.3108 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9333 | |
| 16 | E | A | -2.8284 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9383 | |
| 20 | P | A | -0.8926 | |
| 21 | T | A | -0.8773 | |
| 22 | D | A | -1.6068 | |
| 23 | L | A | -0.4802 | |
| 24 | L | A | -0.1747 | |
| 25 | Y | A | -0.1659 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.0997 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.3641 | |
| 31 | L | A | 0.3087 | |
| 32 | I | A | 0.0753 | |
| 33 | T | A | -0.1601 | |
| 34 | E | A | -0.2954 | |
| 35 | T | A | -0.4074 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.8851 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.7883 | |
| 40 | A | A | -0.3950 | |
| 41 | D | A | -0.0384 | |
| 42 | I | A | 1.7825 | |
| 43 | V | A | 2.4282 | |
| 44 | V | A | 1.4318 | |
| 45 | D | A | -1.0441 | |
| 46 | G | A | -0.6020 | |
| 47 | K | A | -0.2700 | |
| 48 | V | A | 2.0632 | |
| 49 | L | A | 2.4611 | |
| 50 | I | A | 1.4627 | |
| 51 | P | A | 0.2386 | |
| 52 | K | A | -0.5505 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | T | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | F | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.2160 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4001 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.7991 | |
| 70 | K | A | -2.0200 | |
| 71 | L | A | -0.9516 | |
| 72 | P | A | -0.5587 | |
| 73 | L | A | -0.4088 | |
| 74 | P | A | -0.3878 | |
| 75 | S | A | -0.7605 | |
| 76 | P | A | -1.2879 | |
| 77 | D | A | -2.3537 | |
| 78 | F | A | -1.2273 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -3.0638 | |
| 81 | R | A | -3.0771 | |
| 82 | S | A | -1.7859 | |
| 83 | T | A | -1.4325 | |
| 84 | E | A | -1.6501 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3633 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.5821 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -1.0318 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.9992 | |
| 97 | V | A | 0.0000 | |
| 98 | G | A | -0.4692 | |
| 99 | G | A | -0.5921 | |
| 100 | P | A | -0.3977 | |
| 101 | L | A | -0.2723 | |
| 102 | G | A | -0.6089 | |
| 103 | K | A | -1.1523 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3142 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9002 | |
| 108 | H | A | -1.2803 | |
| 109 | A | A | -1.1939 | |
| 110 | N | A | -1.9834 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | N | A | -1.2252 | |
| 117 | V | A | -0.9200 | |
| 118 | D | A | -2.2692 | |
| 119 | N | A | -2.2657 | |
| 120 | P | A | -1.2142 | |
| 121 | T | A | -0.7448 | |
| 122 | T | A | -0.3894 | |
| 123 | Y | A | -0.0347 | |
| 124 | Q | A | -1.0118 | |
| 125 | H | A | -1.8563 | |
| 126 | E | A | -2.4638 | |
| 127 | T | A | -1.7483 | |
| 128 | A | A | -1.2814 | |
| 129 | D | A | -2.2980 | |
| 130 | D | A | -1.7516 | |
| 131 | T | A | -1.0912 | |
| 132 | V | A | -0.5382 | |
| 133 | N | A | -1.2453 | |
| 134 | L | A | -0.5787 | |
| 135 | S | A | -0.4652 | |
| 136 | Y | A | 0.0000 | |
| 137 | T | A | -0.1916 | |
| 138 | P | A | 0.0000 | |
| 139 | I | A | -0.7769 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.2381 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.3045 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.7647 | |
| 155 | Y | A | -0.5140 | |
| 156 | T | A | -0.0640 | |
| 157 | T | A | 0.0000 | |
| 158 | I | A | -0.3650 | |
| 159 | A | A | -0.0951 | |
| 160 | A | A | -0.4883 | |
| 161 | P | A | -0.9185 | |
| 162 | N | A | -1.4803 | |
| 163 | P | A | -1.0256 | |
| 164 | G | A | -0.8019 | |
| 165 | L | A | -0.5413 | |
| 166 | P | A | -0.5830 | |
| 167 | P | A | -0.7497 | |
| 168 | G | A | -0.6479 | |
| 169 | A | A | -0.9904 | |
| 170 | E | A | -1.7443 | |
| 171 | P | A | -1.3576 | |
| 172 | P | A | -0.7184 | |
| 173 | T | A | -0.0729 | |
| 174 | T | A | 0.6638 | |
| 175 | V | A | 1.2269 | |
| 176 | E | A | -0.1944 | |
| 177 | S | A | -0.4359 | |
| 178 | T | A | -0.2688 | |
| 179 | I | A | -0.2393 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.2629 | |
| 182 | H | A | -1.4239 | |
| 183 | G | A | -0.9246 | |
| 184 | D | A | -0.9657 | |
| 185 | K | A | -0.8484 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.7636 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.1158 | |
| 190 | F | A | 0.0257 | |
| 191 | G | A | -0.5482 | |
| 192 | A | A | -0.7123 | |
| 193 | K | A | -0.9128 | |
| 194 | D | A | -1.3208 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -2.0904 | |
| 197 | K | A | -2.0431 | |
| 198 | L | A | -1.5461 | |
| 199 | E | A | -1.8178 | |
| 200 | P | A | -2.1009 | |
| 201 | E | A | -2.4546 | |
| 202 | K | A | -2.8973 | |
| 203 | N | A | -1.8860 | |
| 204 | N | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6385 | |
| 208 | N | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.4296 | |
| 211 | N | A | -2.2870 | |
| 212 | T | A | -1.4409 | |
| 213 | K | A | -1.6049 | |
| 214 | T | A | 0.0000 | |
| 215 | L | A | 0.0000 | |
| 216 | E | A | -1.4429 | |
| 217 | I | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | Y | A | -1.4272 | |
| 220 | E | A | -2.3573 | |
| 221 | A | A | -1.4893 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.5273 | |
| 224 | A | A | -1.5143 | |
| 225 | E | A | -1.2914 | |
| 226 | P | A | -0.6326 | |
| 227 | Y | A | -0.2935 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5262 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.1905 | |
| 234 | Y | A | -0.3260 | |
| 235 | D | A | -1.2244 | |
| 236 | K | A | -1.8736 | |
| 237 | Y | A | -1.4359 | |
| 238 | E | A | -2.0840 | |
| 239 | K | A | -1.9324 | |
| 240 | S | A | -1.8225 | |
| 241 | K | A | -2.1432 | |
| 242 | N | A | -1.6986 | |
| 243 | V | A | -0.5091 | |
| 244 | K | A | -1.4781 | |
| 245 | N | A | -0.9947 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | D | A | -1.2664 | |
| 250 | G | A | -0.7752 | |
| 251 | P | A | -0.1496 | |
| 252 | V | A | 0.4221 | |
| 253 | L | A | 0.6933 | |
| 254 | N | A | -0.6060 | |
| 255 | P | A | -0.2508 | |
| 256 | L | A | 0.2277 | |
| 257 | P | A | -0.1803 | |
| 258 | D | A | -0.4122 | |
| 259 | S | A | 0.0281 | |
| 260 | L | A | 1.0496 | |
| 261 | P | A | 0.1880 | |
| 262 | P | A | -0.1746 | |
| 263 | S | A | 0.0332 | |
| 264 | P | A | 0.4019 | |
| 265 | L | A | 0.9324 | |
| 266 | Y | A | 0.2376 | |
| 267 | T | A | -0.7020 | |
| 268 | K | A | -1.7517 | |
| 269 | P | A | -0.9683 | |
| 270 | P | A | -0.7345 | |
| 271 | P | A | -0.5598 | |
| 272 | T | A | -0.1691 | |
| 273 | S | A | -0.1175 | |
| 274 | P | A | 0.0723 | |
| 275 | F | A | 0.4214 | |
| 276 | A | A | -0.2767 | |
| 277 | T | A | -0.5493 | |
| 278 | R | A | -0.9087 | |
| 279 | P | A | -0.9254 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | -0.0979 | |
| 282 | D | A | -0.4948 | |
| 283 | Y | A | 0.7878 | |
| 284 | F | A | 0.3879 | |
| 285 | S | A | -0.2946 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.2386 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | 0.0000 | |
| 291 | E | A | -2.1404 | |
| 292 | I | A | -1.5061 | |
| 293 | S | A | -1.8065 | |
| 294 | E | A | -2.5761 | |
| 295 | K | A | -2.6659 | |
| 296 | D | A | -1.9932 | |
| 297 | L | A | -1.3188 | |
| 298 | I | A | -0.9626 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3323 | |
| 301 | K | A | -1.6375 | |
| 302 | P | A | -0.8822 | |
| 303 | I | A | -0.0112 | |
| 304 | F | A | -0.3533 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5485 | |
| 307 | K | A | -2.8065 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -0.9333 | |
| 310 | G | A | -0.7477 | |
| 311 | L | A | -0.5853 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.3061 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | Y | A | -0.5372 | |
| 319 | N | A | -0.7930 | |
| 320 | R | A | -1.0217 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4187 | |
| 331 | S | A | 0.0000 | |
| 332 | T | A | -0.7762 | |
| 333 | I | A | -0.9822 | |
| 334 | E | A | -1.6721 | |
| 335 | T | A | -0.7586 | |
| 336 | I | A | 0.5550 | |
| 337 | T | A | 0.5767 | |
| 338 | T | A | 0.6384 | |
| 339 | R | A | 0.1382 | |
| 340 | I | A | 1.7112 | |
| 341 | S | A | 0.4992 | |
| 342 | T | A | -0.0092 | |
| 343 | P | A | -0.4043 | |
| 344 | A | A | -0.1156 | |
| 345 | T | A | -0.3129 | |
| 346 | D | A | -0.7764 | |
| 347 | V | A | 1.2563 | |
| 348 | Y | A | 1.2054 | |
| 349 | D | A | -0.2793 | |
| 350 | A | A | 0.0762 | |
| 351 | S | A | 0.1001 | |
| 352 | N | A | 0.3318 | |
| 353 | Y | A | 1.1433 | |
| 354 | V | A | 1.8325 | |
| 355 | T | A | 0.6023 | |
| 356 | S | A | -0.3154 | |
| 357 | K | A | -1.5515 | |
| 358 | R | A | -1.2705 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.6058 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.3716 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.9107 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.3754 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.6344 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.8800 | |
| 376 | L | A | -0.7876 | |
| 377 | T | A | -0.9486 | |
| 378 | P | A | -1.5287 | |
| 379 | E | A | -2.4634 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.3492 | |
| 382 | E | A | -2.5766 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | A | A | -1.2043 | |
| 386 | R | A | -1.4195 | |
| 387 | L | A | -0.6445 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.8722 | |
| 390 | R | A | -1.1035 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -0.5324 | |
| 393 | V | A | -1.0841 | |
| 394 | N | A | -1.9456 | |
| 395 | A | A | -1.1947 | |
| 396 | N | A | -1.6774 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2117 | |
| 399 | F | A | 1.5650 | |
| 400 | I | A | 0.5963 | |
| 401 | P | A | -0.2788 | |
| 402 | K | A | -1.6249 | |
| 403 | V | A | -0.4428 | |
| 404 | E | A | -2.4758 | |
| 405 | R | A | -2.6425 | |
| 406 | P | A | -1.9628 | |
| 407 | D | A | -2.4309 | |
| 408 | P | A | -1.3134 | |
| 409 | Y | A | 0.0000 | |
| 410 | A | A | -1.2784 | |
| 411 | G | A | -1.4122 | |
| 412 | K | A | -1.9624 | |
| 413 | K | A | -2.6313 | |
| 414 | F | A | -1.8381 | |
| 415 | K | A | -2.0395 | |
| 416 | E | A | -2.8371 | |
| 417 | I | A | -2.1359 | |
| 418 | D | A | -3.0640 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0902 | |
| 421 | D | A | -2.7815 | |
| 422 | K | A | -2.6298 | |
| 423 | L | A | -1.0557 | |
| 424 | S | A | -1.0046 | |
| 425 | S | A | -0.5671 | |
| 426 | N | A | -1.3988 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.8672 | |
| 429 | E | A | -2.7415 | |
| 430 | T | A | -2.2610 | |
| 431 | D | A | -2.4794 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2625 | |
| 435 | A | A | -1.3773 | |
| 436 | Y | A | -0.5653 | |
| 437 | L | A | -0.0234 | |
| 438 | N | A | -1.7059 | |
| 439 | R | A | -2.0109 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine