| Chain sequence(s) |
B: AAAARAATEAKIAALKAQAEAAKEQAKNSFLPLKVTLELQAKALEAEAKALEAAL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.3635 | |
| 2 | A | B | -0.5050 | |
| 3 | A | B | -0.6254 | |
| 4 | A | B | -0.8219 | |
| 5 | R | B | -1.9889 | |
| 6 | A | B | -1.4033 | |
| 7 | A | B | -1.3522 | |
| 8 | T | B | -1.7146 | |
| 9 | E | B | -2.5180 | |
| 10 | A | B | -1.7168 | |
| 11 | K | B | -2.2640 | |
| 12 | I | B | 0.0000 | |
| 13 | A | B | -1.4312 | |
| 14 | A | B | -1.2386 | |
| 15 | L | B | -1.9851 | |
| 16 | K | B | -2.5820 | |
| 17 | A | B | -1.7694 | |
| 18 | Q | B | -2.3596 | |
| 19 | A | B | 0.0000 | |
| 20 | E | B | -3.6190 | |
| 21 | A | B | -2.3692 | |
| 22 | A | B | 0.0000 | |
| 23 | K | B | -3.7096 | |
| 24 | E | B | -4.1461 | |
| 25 | Q | B | -2.8908 | |
| 26 | A | B | 0.0000 | |
| 27 | K | B | -2.9425 | |
| 28 | N | B | -2.1787 | |
| 29 | S | B | -0.1623 | |
| 30 | F | B | 2.2576 | |
| 31 | L | B | 2.3708 | |
| 32 | P | B | 1.6537 | |
| 33 | L | B | 1.6107 | |
| 34 | K | B | 0.1970 | |
| 35 | V | B | 1.2581 | |
| 36 | T | B | 0.5420 | |
| 37 | L | B | -0.8290 | |
| 38 | E | B | -1.5212 | |
| 39 | L | B | 0.1788 | |
| 40 | Q | B | -1.2170 | |
| 41 | A | B | 0.0000 | |
| 42 | K | B | -2.3629 | |
| 43 | A | B | -1.4758 | |
| 44 | L | B | -2.2483 | |
| 45 | E | B | -3.0304 | |
| 46 | A | B | -2.3619 | |
| 47 | E | B | -2.6393 | |
| 48 | A | B | 0.0000 | |
| 49 | K | B | -2.6256 | |
| 50 | A | B | -1.3673 | |
| 51 | L | B | -1.3139 | |
| 52 | E | B | -1.7225 | |
| 53 | A | B | -0.4700 | |
| 54 | A | B | 0.1317 | |
| 55 | L | B | 0.4073 |