| Chain sequence(s) |
A: AELAAYRAALAATRAAAAAMMAAIRADLGDSPEVQALEATMAQLDAATQQLVAALDAKEWATARALAAQVRALVAQQRALLDGIVGRLSAAAQAAYAALVAAAAATAAALDALLAAIAAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.3724 | |
| 2 | E | A | -1.0384 | |
| 3 | L | A | -0.3951 | |
| 4 | A | A | -0.3202 | |
| 5 | A | A | -0.3568 | |
| 6 | Y | A | 0.0000 | |
| 7 | R | A | -0.7106 | |
| 8 | A | A | -0.2860 | |
| 9 | A | A | -0.1355 | |
| 10 | L | A | -0.2295 | |
| 11 | A | A | -0.2939 | |
| 12 | A | A | -0.1895 | |
| 13 | T | A | -0.1382 | |
| 14 | R | A | -0.6636 | |
| 15 | A | A | -0.2227 | |
| 16 | A | A | 0.0634 | |
| 17 | A | A | 0.0000 | |
| 18 | A | A | -0.0928 | |
| 19 | A | A | -0.0242 | |
| 20 | M | A | 0.0000 | |
| 21 | M | A | 0.0000 | |
| 22 | A | A | -0.2395 | |
| 23 | A | A | -0.3456 | |
| 24 | I | A | 0.0000 | |
| 25 | R | A | -1.5799 | |
| 26 | A | A | -0.8296 | |
| 27 | D | A | -1.3785 | |
| 28 | L | A | -1.3522 | |
| 29 | G | A | -1.7190 | |
| 30 | D | A | -2.7011 | |
| 31 | S | A | -1.9445 | |
| 32 | P | A | -1.8108 | |
| 33 | E | A | -2.2322 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -2.3588 | |
| 36 | A | A | -1.2858 | |
| 37 | L | A | 0.0000 | |
| 38 | E | A | -1.2642 | |
| 39 | A | A | -0.7405 | |
| 40 | T | A | -0.5903 | |
| 41 | M | A | -0.3596 | |
| 42 | A | A | -0.4389 | |
| 43 | Q | A | -0.9355 | |
| 44 | L | A | -0.7910 | |
| 45 | D | A | -1.1601 | |
| 46 | A | A | -1.0494 | |
| 47 | A | A | 0.0000 | |
| 48 | T | A | 0.0000 | |
| 49 | Q | A | -1.7391 | |
| 50 | Q | A | -1.5683 | |
| 51 | L | A | 0.0000 | |
| 52 | V | A | -0.9766 | |
| 53 | A | A | -1.3210 | |
| 54 | A | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | D | A | -1.7540 | |
| 57 | A | A | -1.6776 | |
| 58 | K | A | -2.6175 | |
| 59 | E | A | -2.5514 | |
| 60 | W | A | -1.2886 | |
| 61 | A | A | -0.8176 | |
| 62 | T | A | -1.0136 | |
| 63 | A | A | 0.0000 | |
| 64 | R | A | -1.2337 | |
| 65 | A | A | -0.5075 | |
| 66 | L | A | -0.7680 | |
| 67 | A | A | 0.0000 | |
| 68 | A | A | -0.7479 | |
| 69 | Q | A | -0.9614 | |
| 70 | V | A | 0.0000 | |
| 71 | R | A | -0.9680 | |
| 72 | A | A | -0.6948 | |
| 73 | L | A | -0.5588 | |
| 74 | V | A | -0.2614 | |
| 75 | A | A | -0.8195 | |
| 76 | Q | A | -1.1109 | |
| 77 | Q | A | 0.0000 | |
| 78 | R | A | -1.8511 | |
| 79 | A | A | -1.2445 | |
| 80 | L | A | -0.9684 | |
| 81 | L | A | 0.0000 | |
| 82 | D | A | -1.5527 | |
| 83 | G | A | -1.4449 | |
| 84 | I | A | 0.0000 | |
| 85 | V | A | -0.8861 | |
| 86 | G | A | -1.4781 | |
| 87 | R | A | -2.1429 | |
| 88 | L | A | 0.0000 | |
| 89 | S | A | -0.7297 | |
| 90 | A | A | -0.3196 | |
| 91 | A | A | -0.1422 | |
| 92 | A | A | 0.0000 | |
| 93 | Q | A | -0.5704 | |
| 94 | A | A | 0.0293 | |
| 95 | A | A | 0.1721 | |
| 96 | Y | A | 0.0797 | |
| 97 | A | A | 0.4323 | |
| 98 | A | A | 0.4411 | |
| 99 | L | A | 0.0000 | |
| 100 | V | A | 0.9673 | |
| 101 | A | A | 0.6584 | |
| 102 | A | A | 0.3992 | |
| 103 | A | A | 0.5096 | |
| 104 | A | A | 0.4169 | |
| 105 | A | A | 0.1216 | |
| 106 | T | A | -0.1104 | |
| 107 | A | A | -0.4790 | |
| 108 | A | A | -0.5056 | |
| 109 | A | A | -0.6933 | |
| 110 | L | A | 0.0000 | |
| 111 | D | A | -1.7783 | |
| 112 | A | A | -0.9048 | |
| 113 | L | A | 0.0000 | |
| 114 | L | A | -0.6670 | |
| 115 | A | A | -0.2105 | |
| 116 | A | A | 0.0979 | |
| 117 | I | A | 0.0000 | |
| 118 | A | A | 0.5876 | |
| 119 | A | A | 0.8828 | |
| 120 | L | A | 1.6065 |