Project name: 1104

Status: done

Started: 2025-06-23 11:44:18
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Chain sequence(s) H: DVQLQESGGGSVQAGGSLRLSCALSGNTNSNYRMAWFRQAPAKEREGVAVIWGNGYTEYADSVKGRFTISQDNAKHTLYLQMNSLKPEDTAMYYCAADSSDAWAGPFSPGRYNYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:39)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:40)
Show buried residues

Minimal score value
-3.1474
Maximal score value
0.5718
Average score
-0.9004
Total score value
-112.5534

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -2.4488
2 V H 0.0000
3 Q H -1.9807
4 L H 0.0000
5 Q H -1.7298
6 E H 0.0000
7 S H -1.0968
8 G H -0.9976
9 G H -0.8999
11 G H -0.7117
12 S H -0.5599
13 V H -0.7265
14 Q H -1.6205
15 A H -1.7212
16 G H -1.3927
17 G H -1.0803
18 S H -1.0524
19 L H -0.7398
20 R H -1.4202
21 L H 0.0000
22 S H -0.7055
23 C H 0.0000
24 A H -0.9800
25 L H -1.1401
26 S H -1.5667
27 G H -1.7550
28 N H -2.1375
29 T H 0.0000
30 N H -2.1844
35 S H -1.9353
36 N H -1.8746
37 Y H 0.0000
38 R H 0.0000
39 M H 0.0000
40 A H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.6365
45 A H -1.5680
46 P H -1.0143
47 A H -1.3601
48 K H -2.9111
49 E H -3.1474
50 R H -2.1602
51 E H -1.5377
52 G H -0.6049
53 V H 0.0000
54 A H 0.0000
55 V H 0.0000
56 I H 0.0000
57 W H 0.0000
58 G H -1.5811
59 N H -1.3156
63 G H -0.6969
64 Y H 0.5718
65 T H 0.1168
66 E H -0.4831
67 Y H -0.9690
68 A H -1.3542
69 D H -2.4988
70 S H -1.8119
71 V H 0.0000
72 K H -2.6849
74 G H -1.7929
75 R H -1.4569
76 F H 0.0000
77 T H -0.8448
78 I H 0.0000
79 S H -0.3648
80 Q H -1.1992
81 D H -1.6657
82 N H -2.4529
83 A H -1.5706
84 K H -2.3444
85 H H -1.9149
86 T H -1.2686
87 L H 0.0000
88 Y H -0.3864
89 L H 0.0000
90 Q H -1.0263
91 M H 0.0000
92 N H -1.3490
93 S H -1.3046
94 L H 0.0000
95 K H -2.5937
96 P H -1.9806
97 E H -2.4088
98 D H 0.0000
99 T H -1.0588
100 A H 0.0000
101 M H -0.3117
102 Y H 0.0000
103 Y H -0.4312
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 D H 0.0000
108 S H -1.5792
109 S H -1.3567
110 D H -1.9795
111 A H -0.5186
111A W H 0.3079
111B A H -0.0166
111C G H -0.2438
112C P H -0.3278
112B F H -0.2309
112A S H -0.6203
112 P H -0.7803
113 G H -0.9804
114 R H -1.1325
115 Y H 0.0000
116 N H -1.2149
117 Y H -0.5880
118 W H -0.3695
119 G H -1.0025
120 Q H -1.5292
121 G H -0.8790
122 T H -0.8767
123 Q H -0.8359
124 V H 0.0000
125 T H -0.8616
126 V H 0.0000
127 S H -1.2029
128 S H -0.9027
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Laboratory of Theory of Biopolymers 2018