| Chain sequence(s) |
A: GSIPCGESCVYIPCISSIVGCACKSKVCYKN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1107 | |
| 2 | S | A | -0.0947 | |
| 3 | I | A | 1.1613 | |
| 4 | P | A | 0.2605 | |
| 5 | C | A | 0.5639 | |
| 6 | G | A | -0.1509 | |
| 7 | E | A | 0.0334 | |
| 8 | S | A | 0.4631 | |
| 9 | C | A | 1.1260 | |
| 10 | V | A | 2.0248 | |
| 11 | Y | A | 2.2234 | |
| 12 | I | A | 1.8130 | |
| 13 | P | A | 1.1505 | |
| 14 | C | A | 0.0000 | |
| 15 | I | A | 2.5325 | |
| 16 | S | A | 1.9688 | |
| 17 | S | A | 1.9120 | |
| 18 | I | A | 3.1917 | |
| 19 | V | A | 2.7682 | |
| 20 | G | A | 0.9561 | |
| 21 | C | A | 0.0000 | |
| 22 | A | A | -0.0391 | |
| 23 | C | A | -0.0180 | |
| 24 | K | A | -1.1421 | |
| 25 | S | A | -0.9311 | |
| 26 | K | A | -0.8628 | |
| 27 | V | A | -0.4093 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | -0.4353 | |
| 30 | K | A | -0.7799 | |
| 31 | N | A | -1.6085 |