| Chain sequence(s) |
A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCPSGQFKCNSGRCVPPNWLCDGVNDCPDNSDEANCPPRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.2842 | |
| 2 | G | A | -0.8462 | |
| 3 | P | A | -0.9546 | |
| 4 | G | A | -1.3620 | |
| 5 | R | A | -1.6786 | |
| 6 | F | A | -0.9915 | |
| 7 | Q | A | -1.7929 | |
| 8 | C | A | 0.0000 | |
| 9 | E | A | -2.5936 | |
| 10 | S | A | -1.5025 | |
| 11 | G | A | -1.3047 | |
| 12 | Q | A | -1.0030 | |
| 13 | C | A | -0.7571 | |
| 14 | I | A | 0.0000 | |
| 15 | P | A | -0.5594 | |
| 16 | A | A | -0.6244 | |
| 17 | T | A | -0.2771 | |
| 18 | W | A | -0.4865 | |
| 19 | V | A | -1.0588 | |
| 20 | C | A | -1.5541 | |
| 21 | D | A | -2.1312 | |
| 22 | G | A | -2.2483 | |
| 23 | E | A | -3.2507 | |
| 24 | N | A | -2.9222 | |
| 25 | D | A | -1.5354 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | 0.3585 | |
| 28 | D | A | -1.4082 | |
| 29 | D | A | -2.4001 | |
| 30 | S | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | E | A | -2.5618 | |
| 33 | K | A | -2.5683 | |
| 34 | S | A | -1.3283 | |
| 35 | C | A | -0.7566 | |
| 36 | A | A | -0.4031 | |
| 37 | T | A | -0.2715 | |
| 38 | T | A | -0.0621 | |
| 39 | A | A | -0.1628 | |
| 40 | P | A | -0.7238 | |
| 41 | T | A | -0.4757 | |
| 42 | C | A | -0.8586 | |
| 43 | P | A | -0.5357 | |
| 44 | S | A | -0.5438 | |
| 45 | G | A | -0.9752 | |
| 46 | Q | A | -0.9243 | |
| 47 | F | A | -0.7057 | |
| 48 | K | A | -1.6156 | |
| 49 | C | A | 0.0000 | |
| 50 | N | A | -2.2791 | |
| 51 | S | A | -1.9457 | |
| 52 | G | A | -1.8308 | |
| 53 | R | A | -2.2791 | |
| 54 | C | A | -1.3283 | |
| 55 | V | A | 0.0000 | |
| 56 | P | A | -0.5877 | |
| 57 | P | A | -0.9642 | |
| 58 | N | A | -1.4183 | |
| 59 | W | A | -0.5709 | |
| 60 | L | A | -0.6641 | |
| 61 | C | A | -1.3527 | |
| 62 | D | A | -1.7709 | |
| 63 | G | A | -0.9406 | |
| 64 | V | A | -0.1872 | |
| 65 | N | A | -1.5491 | |
| 66 | D | A | -1.2451 | |
| 67 | C | A | 0.0000 | |
| 68 | P | A | -1.7249 | |
| 69 | D | A | -2.1284 | |
| 70 | N | A | -2.0517 | |
| 71 | S | A | -1.9059 | |
| 72 | D | A | 0.0000 | |
| 73 | E | A | -1.2670 | |
| 74 | A | A | -1.0476 | |
| 75 | N | A | -1.2966 | |
| 76 | C | A | -1.0370 | |
| 77 | P | A | -1.0426 | |
| 78 | P | A | -1.3443 | |
| 79 | R | A | -1.9992 | |
| 80 | T | A | -1.0386 |