| Chain sequence(s) |
B: QRTESIIARALYYDLIS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:07)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | B | -2.3301 | |
| 2 | R | B | -2.7801 | |
| 3 | T | B | -1.9309 | |
| 4 | E | B | -2.0520 | |
| 5 | S | B | 0.2030 | |
| 6 | I | B | 2.2198 | |
| 7 | I | B | 3.1276 | |
| 8 | A | B | 1.8416 | |
| 9 | R | B | 1.4444 | |
| 10 | A | B | 2.1989 | |
| 11 | L | B | 3.1440 | |
| 12 | Y | B | 3.1930 | |
| 13 | Y | B | 2.4229 | |
| 14 | D | B | 0.6668 | |
| 15 | L | B | 2.5509 | |
| 16 | I | B | 2.8462 | |
| 17 | S | B | 1.1064 |