Project name: 4d3f3a46a2abf6

Status: done

Started: 2026-05-08 07:35:04
Settings
Chain sequence(s) B: QRTESIIARALYYDLIS
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-2.7801
Maximal score value
3.193
Average score
1.0513
Total score value
17.8724

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q B -2.3301
2 R B -2.7801
3 T B -1.9309
4 E B -2.0520
5 S B 0.2030
6 I B 2.2198
7 I B 3.1276
8 A B 1.8416
9 R B 1.4444
10 A B 2.1989
11 L B 3.1440
12 Y B 3.1930
13 Y B 2.4229
14 D B 0.6668
15 L B 2.5509
16 I B 2.8462
17 S B 1.1064
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018