Project name: KGHKGHK4

Status: done

Started: 2026-02-22 09:43:47
Settings
Chain sequence(s) A: KGHKGHK
C: KGHKGHK
B: KGHKGHK
D: KGHKGHK
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:48)
Show buried residues

Minimal score value
-5.1436
Maximal score value
0.0
Average score
-3.4402
Total score value
-96.326

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -4.3767
2 G A 0.0000
3 H A -4.0767
4 K A -4.4637
5 G A -2.7498
6 H A -2.4806
7 K A -2.6997
1 K B -3.7761
2 G B -4.5696
3 H B -4.7312
4 K B -5.1436
5 G B -4.0966
6 H B -3.7047
7 K B -2.6626
1 K C -4.1776
2 G C -3.6836
3 H C -3.7944
4 K C -4.1525
5 G C -2.9823
6 H C -3.0036
7 K C -3.0263
1 K D -4.7310
2 G D 0.0000
3 H D -4.0361
4 K D -4.2255
5 G D -2.8597
6 H D -3.2763
7 K D -2.8455
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Laboratory of Theory of Biopolymers 2018