| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCAASGSIFSINAMHWFRQAPGKQRELVAVITSGGSTIYAESVKGRFTISRDNSKNTVYLQMNSLRPEDTAVYYCNAHVGLKVPTIQELSLGFGSWGQGTLVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.2333 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.2336 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 1.0329 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1360 | |
| 8 | G | H | -0.6023 | |
| 9 | G | H | 0.2429 | |
| 11 | G | H | 0.8916 | |
| 12 | L | H | 1.5116 | |
| 13 | V | H | 0.0029 | |
| 14 | Q | H | -1.3432 | |
| 15 | P | H | -1.7560 | |
| 16 | G | H | -1.3870 | |
| 17 | G | H | -0.9083 | |
| 18 | S | H | -0.9684 | |
| 19 | L | H | -0.4557 | |
| 20 | R | H | -1.1777 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1851 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2485 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9808 | |
| 27 | G | H | -0.9294 | |
| 28 | S | H | -0.1673 | |
| 29 | I | H | 0.6348 | |
| 30 | F | H | 2.1875 | |
| 35 | S | H | 0.0000 | |
| 36 | I | H | 0.0000 | |
| 37 | N | H | 0.2132 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.3341 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.4057 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.0433 | |
| 45 | A | H | -1.1060 | |
| 46 | P | H | -0.9893 | |
| 47 | G | H | -1.3365 | |
| 48 | K | H | -1.9521 | |
| 49 | Q | H | -2.2649 | |
| 50 | R | H | -1.8210 | |
| 51 | E | H | -0.9222 | |
| 52 | L | H | 0.4886 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.3868 | |
| 58 | S | H | -0.6602 | |
| 59 | G | H | -0.8094 | |
| 63 | G | H | -0.9344 | |
| 64 | S | H | -0.1338 | |
| 65 | T | H | 0.6994 | |
| 66 | I | H | 1.6968 | |
| 67 | Y | H | 0.2657 | |
| 68 | A | H | -0.7226 | |
| 69 | E | H | -2.2506 | |
| 70 | S | H | -1.7375 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3049 | |
| 74 | G | H | -1.6944 | |
| 75 | R | H | -1.4019 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.4428 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5143 | |
| 80 | R | H | -1.3231 | |
| 81 | D | H | -1.9711 | |
| 82 | N | H | -2.4621 | |
| 83 | S | H | -1.9855 | |
| 84 | K | H | -2.7021 | |
| 85 | N | H | -2.1085 | |
| 86 | T | H | -1.2602 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3485 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7783 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.1333 | |
| 93 | S | H | -1.1778 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2808 | |
| 96 | P | H | -1.8903 | |
| 97 | E | H | -2.3226 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4613 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5961 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.5541 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | H | H | -0.3868 | |
| 108 | V | H | 0.3718 | |
| 109 | G | H | 0.0000 | |
| 110 | L | H | 0.8614 | |
| 111 | K | H | 0.2262 | |
| 111A | V | H | 1.3303 | |
| 111B | P | H | 0.6374 | |
| 111C | T | H | 0.5962 | |
| 112D | I | H | 1.2385 | |
| 112C | Q | H | 0.4184 | |
| 112B | E | H | 0.5821 | |
| 112A | L | H | 1.6459 | |
| 112 | S | H | 1.1423 | |
| 113 | L | H | 1.7204 | |
| 114 | G | H | 0.3547 | |
| 115 | F | H | 1.0339 | |
| 116 | G | H | -0.0381 | |
| 117 | S | H | 0.0000 | |
| 118 | W | H | 0.9665 | |
| 119 | G | H | 0.1418 | |
| 120 | Q | H | -0.4215 | |
| 121 | G | H | 0.2841 | |
| 122 | T | H | 0.5548 | |
| 123 | L | H | 1.5718 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3387 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7113 | |
| 128 | S | H | -0.8839 |