Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWSARLKVARYYRITYGETGGNSPVQEFTVPKNVYTATISGLKPGVDYTITVYAVTLLRDYGPISINYRT
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30) [INFO] Main: Simulation completed successfully. (00:00:31) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | V | A | 1.6162 | |
2 | S | A | 0.4482 | |
3 | D | A | -0.5254 | |
4 | V | A | -0.0803 | |
5 | P | A | 0.0000 | |
6 | R | A | -1.7243 | |
7 | D | A | -2.5318 | |
8 | L | A | 0.0000 | |
9 | E | A | -1.8243 | |
10 | V | A | -0.0638 | |
11 | V | A | 1.5650 | |
12 | A | A | 0.9023 | |
13 | A | A | 0.4705 | |
14 | T | A | -0.4205 | |
15 | P | A | -0.9102 | |
16 | T | A | -1.0500 | |
17 | S | A | -0.5873 | |
18 | L | A | 0.0000 | |
19 | L | A | 0.7231 | |
20 | I | A | 0.0000 | |
21 | S | A | 0.0850 | |
22 | W | A | 0.0000 | |
23 | S | A | -0.4124 | |
24 | A | A | 0.0762 | |
25 | R | A | 0.0000 | |
26 | L | A | 1.3349 | |
27 | K | A | -0.1194 | |
28 | V | A | 0.7679 | |
29 | A | A | 0.0000 | |
30 | R | A | -1.4558 | |
31 | Y | A | -0.3901 | |
32 | Y | A | 0.0000 | |
33 | R | A | -1.1635 | |
34 | I | A | 0.0000 | |
35 | T | A | 0.0000 | |
36 | Y | A | -0.6690 | |
37 | G | A | -1.3450 | |
38 | E | A | -2.4345 | |
39 | T | A | -1.6645 | |
40 | G | A | -1.6750 | |
41 | G | A | -1.6696 | |
42 | N | A | -1.7838 | |
43 | S | A | -1.1541 | |
44 | P | A | -0.6303 | |
45 | V | A | -0.1703 | |
46 | Q | A | -1.4241 | |
47 | E | A | -1.8155 | |
48 | F | A | -0.6190 | |
49 | T | A | -0.3437 | |
50 | V | A | 0.0000 | |
51 | P | A | -0.7957 | |
52 | K | A | -1.0475 | |
53 | N | A | -0.9223 | |
54 | V | A | 0.6953 | |
55 | Y | A | 1.3132 | |
56 | T | A | 0.8153 | |
57 | A | A | 0.0000 | |
58 | T | A | 0.2104 | |
59 | I | A | 0.0000 | |
60 | S | A | -0.6593 | |
61 | G | A | -1.0590 | |
62 | L | A | 0.0000 | |
63 | K | A | -2.2916 | |
64 | P | A | -1.6083 | |
65 | G | A | -1.2280 | |
66 | V | A | -1.3385 | |
67 | D | A | -1.9566 | |
68 | Y | A | 0.0000 | |
69 | T | A | -1.0397 | |
70 | I | A | 0.0000 | |
71 | T | A | -0.2209 | |
72 | V | A | 0.0000 | |
73 | Y | A | -0.4020 | |
74 | A | A | 0.0000 | |
75 | V | A | 0.0000 | |
76 | T | A | -0.3893 | |
77 | L | A | 1.4410 | |
78 | L | A | 0.8558 | |
79 | R | A | -1.6784 | |
80 | D | A | -2.4847 | |
81 | Y | A | 0.0000 | |
82 | G | A | -0.8634 | |
83 | P | A | -0.5298 | |
84 | I | A | -0.1162 | |
85 | S | A | -0.6453 | |
86 | I | A | -0.9484 | |
87 | N | A | -1.9596 | |
88 | Y | A | -1.5927 | |
89 | R | A | -2.0816 | |
90 | T | A | -1.5286 |