| Chain sequence(s) |
A: FKFEKGH
C: FKFEKGH B: FKFEKGH E: FKFEKGH D: FKFEKGH G: FKFEKGH F: FKFEKGH I: FKFEKGH H: FKFEKGH K: FKFEKGH J: FKFEKGH M: FKFEKGH L: FKFEKGH O: FKFEKGH N: FKFEKGH Q: FKFEKGH P: FKFEKGH S: FKFEKGH R: FKFEKGH T: FKFEKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:47)
[INFO] Main: Simulation completed successfully. (00:13:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -1.0139 | |
| 2 | K | A | -1.5327 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -1.3719 | |
| 5 | K | A | -1.0781 | |
| 6 | G | A | -1.2586 | |
| 7 | H | A | -1.5411 | |
| 1 | F | B | -0.9684 | |
| 2 | K | B | -1.8346 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -1.8748 | |
| 5 | K | B | -1.2376 | |
| 6 | G | B | -1.4049 | |
| 7 | H | B | -1.5306 | |
| 1 | F | C | -0.9967 | |
| 2 | K | C | -1.6894 | |
| 3 | F | C | 0.0000 | |
| 4 | E | C | -1.6530 | |
| 5 | K | C | -1.0730 | |
| 6 | G | C | -1.4044 | |
| 7 | H | C | -1.4139 | |
| 1 | F | D | -0.8493 | |
| 2 | K | D | -1.4952 | |
| 3 | F | D | 0.0000 | |
| 4 | E | D | -1.5261 | |
| 5 | K | D | -1.3303 | |
| 6 | G | D | -1.4658 | |
| 7 | H | D | -1.4563 | |
| 1 | F | E | -0.8190 | |
| 2 | K | E | -1.6704 | |
| 3 | F | E | 0.0000 | |
| 4 | E | E | -1.5717 | |
| 5 | K | E | -1.1357 | |
| 6 | G | E | -1.4534 | |
| 7 | H | E | -1.4475 | |
| 1 | F | F | -1.1669 | |
| 2 | K | F | -1.6899 | |
| 3 | F | F | 0.0000 | |
| 4 | E | F | -1.1124 | |
| 5 | K | F | -0.4750 | |
| 6 | G | F | -0.9473 | |
| 7 | H | F | -1.2151 | |
| 1 | F | G | 0.6526 | |
| 2 | K | G | -1.5315 | |
| 3 | F | G | -1.1455 | |
| 4 | E | G | -2.4605 | |
| 5 | K | G | -1.6787 | |
| 6 | G | G | -1.5756 | |
| 7 | H | G | -1.2697 | |
| 1 | F | H | 1.0614 | |
| 2 | K | H | -0.6625 | |
| 3 | F | H | -0.6302 | |
| 4 | E | H | -1.8719 | |
| 5 | K | H | -1.7929 | |
| 6 | G | H | -1.7140 | |
| 7 | H | H | -1.4505 | |
| 1 | F | I | -0.7619 | |
| 2 | K | I | -1.9736 | |
| 3 | F | I | 0.0000 | |
| 4 | E | I | -1.9297 | |
| 5 | K | I | -1.2628 | |
| 6 | G | I | -1.3630 | |
| 7 | H | I | -1.2317 | |
| 1 | F | J | -1.0732 | |
| 2 | K | J | -1.6403 | |
| 3 | F | J | 0.0000 | |
| 4 | E | J | -1.6844 | |
| 5 | K | J | -1.1221 | |
| 6 | G | J | -1.2336 | |
| 7 | H | J | -1.2046 | |
| 1 | F | K | -0.5760 | |
| 2 | K | K | -1.7111 | |
| 3 | F | K | 0.0000 | |
| 4 | E | K | -2.2690 | |
| 5 | K | K | -1.6155 | |
| 6 | G | K | -1.7038 | |
| 7 | H | K | -1.7034 | |
| 1 | F | L | -0.7330 | |
| 2 | K | L | -1.6932 | |
| 3 | F | L | 0.0000 | |
| 4 | E | L | -2.0326 | |
| 5 | K | L | -1.5325 | |
| 6 | G | L | -1.6695 | |
| 7 | H | L | -1.6856 | |
| 1 | F | M | -0.6924 | |
| 2 | K | M | -1.6817 | |
| 3 | F | M | 0.0000 | |
| 4 | E | M | -2.1237 | |
| 5 | K | M | -1.6947 | |
| 6 | G | M | -1.7100 | |
| 7 | H | M | -1.7382 | |
| 1 | F | N | -1.1273 | |
| 2 | K | N | -1.6420 | |
| 3 | F | N | 0.0000 | |
| 4 | E | N | -1.6288 | |
| 5 | K | N | -1.0217 | |
| 6 | G | N | -1.2636 | |
| 7 | H | N | -1.4501 | |
| 1 | F | O | -0.6246 | |
| 2 | K | O | -1.5427 | |
| 3 | F | O | 0.0000 | |
| 4 | E | O | -1.6517 | |
| 5 | K | O | -1.3868 | |
| 6 | G | O | -1.5974 | |
| 7 | H | O | -1.5736 | |
| 1 | F | P | -1.2154 | |
| 2 | K | P | -2.1820 | |
| 3 | F | P | 0.0000 | |
| 4 | E | P | -1.7582 | |
| 5 | K | P | 0.0000 | |
| 6 | G | P | -1.1741 | |
| 7 | H | P | -1.2134 | |
| 1 | F | Q | -0.9931 | |
| 2 | K | Q | -1.9170 | |
| 3 | F | Q | 0.0000 | |
| 4 | E | Q | -1.9170 | |
| 5 | K | Q | -1.0740 | |
| 6 | G | Q | -1.3730 | |
| 7 | H | Q | -1.4052 | |
| 1 | F | R | -1.4799 | |
| 2 | K | R | -1.6984 | |
| 3 | F | R | 0.0000 | |
| 4 | E | R | -0.8954 | |
| 5 | K | R | -0.3554 | |
| 6 | G | R | -0.9022 | |
| 7 | H | R | -1.2847 | |
| 1 | F | S | 1.2166 | |
| 2 | K | S | -0.3190 | |
| 3 | F | S | -0.1011 | |
| 4 | E | S | -2.0909 | |
| 5 | K | S | -2.6173 | |
| 6 | G | S | -2.2107 | |
| 7 | H | S | -1.6539 | |
| 1 | F | T | -0.0362 | |
| 2 | K | T | -1.8980 | |
| 3 | F | T | -1.5351 | |
| 4 | E | T | -2.6081 | |
| 5 | K | T | -1.5460 | |
| 6 | G | T | -1.4809 | |
| 7 | H | T | -1.3684 |