Project name: 4d82d5bc6624679

Status: done

Started: 2026-02-12 13:27:27
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Chain sequence(s) A: FKFEKGH
C: FKFEKGH
B: FKFEKGH
E: FKFEKGH
D: FKFEKGH
G: FKFEKGH
F: FKFEKGH
I: FKFEKGH
H: FKFEKGH
K: FKFEKGH
J: FKFEKGH
M: FKFEKGH
L: FKFEKGH
O: FKFEKGH
N: FKFEKGH
Q: FKFEKGH
P: FKFEKGH
S: FKFEKGH
R: FKFEKGH
T: FKFEKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:13:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:13:52)
Show buried residues

Minimal score value
-2.6173
Maximal score value
1.2166
Average score
-1.1887
Total score value
-166.4189

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -1.0139
2 K A -1.5327
3 F A 0.0000
4 E A -1.3719
5 K A -1.0781
6 G A -1.2586
7 H A -1.5411
1 F B -0.9684
2 K B -1.8346
3 F B 0.0000
4 E B -1.8748
5 K B -1.2376
6 G B -1.4049
7 H B -1.5306
1 F C -0.9967
2 K C -1.6894
3 F C 0.0000
4 E C -1.6530
5 K C -1.0730
6 G C -1.4044
7 H C -1.4139
1 F D -0.8493
2 K D -1.4952
3 F D 0.0000
4 E D -1.5261
5 K D -1.3303
6 G D -1.4658
7 H D -1.4563
1 F E -0.8190
2 K E -1.6704
3 F E 0.0000
4 E E -1.5717
5 K E -1.1357
6 G E -1.4534
7 H E -1.4475
1 F F -1.1669
2 K F -1.6899
3 F F 0.0000
4 E F -1.1124
5 K F -0.4750
6 G F -0.9473
7 H F -1.2151
1 F G 0.6526
2 K G -1.5315
3 F G -1.1455
4 E G -2.4605
5 K G -1.6787
6 G G -1.5756
7 H G -1.2697
1 F H 1.0614
2 K H -0.6625
3 F H -0.6302
4 E H -1.8719
5 K H -1.7929
6 G H -1.7140
7 H H -1.4505
1 F I -0.7619
2 K I -1.9736
3 F I 0.0000
4 E I -1.9297
5 K I -1.2628
6 G I -1.3630
7 H I -1.2317
1 F J -1.0732
2 K J -1.6403
3 F J 0.0000
4 E J -1.6844
5 K J -1.1221
6 G J -1.2336
7 H J -1.2046
1 F K -0.5760
2 K K -1.7111
3 F K 0.0000
4 E K -2.2690
5 K K -1.6155
6 G K -1.7038
7 H K -1.7034
1 F L -0.7330
2 K L -1.6932
3 F L 0.0000
4 E L -2.0326
5 K L -1.5325
6 G L -1.6695
7 H L -1.6856
1 F M -0.6924
2 K M -1.6817
3 F M 0.0000
4 E M -2.1237
5 K M -1.6947
6 G M -1.7100
7 H M -1.7382
1 F N -1.1273
2 K N -1.6420
3 F N 0.0000
4 E N -1.6288
5 K N -1.0217
6 G N -1.2636
7 H N -1.4501
1 F O -0.6246
2 K O -1.5427
3 F O 0.0000
4 E O -1.6517
5 K O -1.3868
6 G O -1.5974
7 H O -1.5736
1 F P -1.2154
2 K P -2.1820
3 F P 0.0000
4 E P -1.7582
5 K P 0.0000
6 G P -1.1741
7 H P -1.2134
1 F Q -0.9931
2 K Q -1.9170
3 F Q 0.0000
4 E Q -1.9170
5 K Q -1.0740
6 G Q -1.3730
7 H Q -1.4052
1 F R -1.4799
2 K R -1.6984
3 F R 0.0000
4 E R -0.8954
5 K R -0.3554
6 G R -0.9022
7 H R -1.2847
1 F S 1.2166
2 K S -0.3190
3 F S -0.1011
4 E S -2.0909
5 K S -2.6173
6 G S -2.2107
7 H S -1.6539
1 F T -0.0362
2 K T -1.8980
3 F T -1.5351
4 E T -2.6081
5 K T -1.5460
6 G T -1.4809
7 H T -1.3684
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Laboratory of Theory of Biopolymers 2018