| Chain sequence(s) |
A: GPLPLNPEPKPLPTTSYVTPTDLLYVAETDLITETGHPTADIVVNGKVVVPKVSAYQYLVFKLTLPDPNKLPLPSADFVDPATERLIWQLEAYKIHVFGPLGKGTYGHPNFNRFGNVDNPTEYQHETADVTQNYSFTPKRLQEYIIGDEPPLGVYTAPAAPEPGLPPGARLPLKEVTTIIQHGDMADIGFGAKDYAKLEPSKDDVPDLIRDTRTIRVDYEGMRAEPYGRRMFDYNEKESSKDSEKYVKAGPDLEPLPDEPPPSPLYVKPPPTSPYAVRPSTNYFTIPDAGEITEDDLLFNKPIFFEKTPGLNNGVLWHNQLYITVLDNTRSEIETIRTRISTPAIDVYDPSNYVTSKRYTREYQLSLIVRLCRVPLTPETLAYLERLDPRILVDWNLPDVPPVERPDPYAGKKFHEIDLTDKLSSDLSKTELGQLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2248 | |
| 2 | P | A | 0.4614 | |
| 3 | L | A | 1.3555 | |
| 4 | P | A | 0.3814 | |
| 5 | L | A | 0.9188 | |
| 6 | N | A | -1.0457 | |
| 7 | P | A | -1.5868 | |
| 8 | E | A | -2.8206 | |
| 9 | P | A | -2.2164 | |
| 10 | K | A | -2.1468 | |
| 11 | P | A | -0.8037 | |
| 12 | L | A | 0.4699 | |
| 13 | P | A | 0.1940 | |
| 14 | T | A | 0.0000 | |
| 15 | T | A | -0.2642 | |
| 16 | S | A | -0.0257 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.3899 | |
| 20 | P | A | -0.7841 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6893 | |
| 23 | L | A | -0.5515 | |
| 24 | L | A | -0.3627 | |
| 25 | Y | A | -0.1537 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.5191 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2631 | |
| 31 | L | A | 0.3547 | |
| 32 | I | A | 0.1209 | |
| 33 | T | A | -0.1246 | |
| 34 | E | A | -0.4450 | |
| 35 | T | A | -0.4155 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.8670 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.7554 | |
| 40 | A | A | -0.5433 | |
| 41 | D | A | -0.0405 | |
| 42 | I | A | 1.8223 | |
| 43 | V | A | 2.5327 | |
| 44 | V | A | 1.7331 | |
| 45 | N | A | -0.5151 | |
| 46 | G | A | -0.3370 | |
| 47 | K | A | -0.1078 | |
| 48 | V | A | 2.1409 | |
| 49 | V | A | 2.5515 | |
| 50 | V | A | 1.4467 | |
| 51 | P | A | 0.2383 | |
| 52 | K | A | -0.4669 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.3557 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.4047 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3724 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.5148 | |
| 70 | K | A | -1.9686 | |
| 71 | L | A | -0.8186 | |
| 72 | P | A | -0.4077 | |
| 73 | L | A | -0.1461 | |
| 74 | P | A | -0.2468 | |
| 75 | S | A | -0.6151 | |
| 76 | A | A | -0.9713 | |
| 77 | D | A | -1.9952 | |
| 78 | F | A | -0.9392 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.0361 | |
| 81 | P | A | -1.2763 | |
| 82 | A | A | -0.6614 | |
| 83 | T | A | -0.7706 | |
| 84 | E | A | -1.1093 | |
| 85 | R | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | Q | A | -0.3808 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -0.4923 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.3331 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.4923 | |
| 99 | G | A | -0.4009 | |
| 100 | P | A | -0.6315 | |
| 101 | L | A | -0.4778 | |
| 102 | G | A | -1.2045 | |
| 103 | K | A | -1.6486 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.6071 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.8288 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.7872 | |
| 110 | N | A | -2.6029 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.4876 | |
| 113 | R | A | -0.9585 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | N | A | -1.6002 | |
| 117 | V | A | -1.0177 | |
| 118 | D | A | -2.1978 | |
| 119 | N | A | -2.4264 | |
| 120 | P | A | -1.6693 | |
| 121 | T | A | -1.5258 | |
| 122 | E | A | -2.1043 | |
| 123 | Y | A | -0.9581 | |
| 124 | Q | A | -1.8018 | |
| 125 | H | A | -1.7888 | |
| 126 | E | A | -2.4730 | |
| 127 | T | A | -1.6359 | |
| 128 | A | A | -1.2091 | |
| 129 | D | A | -2.1990 | |
| 130 | V | A | -1.7073 | |
| 131 | T | A | -1.7462 | |
| 132 | Q | A | -2.0881 | |
| 133 | N | A | -2.1484 | |
| 134 | Y | A | -1.1275 | |
| 135 | S | A | -0.6001 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.4808 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | -1.6138 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.3262 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.2724 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | 0.0000 | |
| 155 | Y | A | 0.0000 | |
| 156 | T | A | -1.2701 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.2493 | |
| 159 | A | A | -0.2522 | |
| 160 | A | A | -0.3848 | |
| 161 | P | A | -0.9286 | |
| 162 | E | A | -1.8694 | |
| 163 | P | A | -1.2443 | |
| 164 | G | A | -0.8192 | |
| 165 | L | A | -0.4352 | |
| 166 | P | A | -0.4944 | |
| 167 | P | A | -0.7110 | |
| 168 | G | A | -0.5536 | |
| 169 | A | A | -0.6213 | |
| 170 | R | A | -1.2140 | |
| 171 | L | A | 0.1062 | |
| 172 | P | A | 0.0361 | |
| 173 | L | A | 0.3201 | |
| 174 | K | A | -1.5035 | |
| 175 | E | A | -2.1575 | |
| 176 | V | A | -0.8959 | |
| 177 | T | A | -0.6028 | |
| 178 | T | A | -0.1718 | |
| 179 | I | A | -0.1345 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.9416 | |
| 182 | H | A | -1.1096 | |
| 183 | G | A | -0.6185 | |
| 184 | D | A | -0.8311 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.9157 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4849 | |
| 190 | F | A | -0.0737 | |
| 191 | G | A | -0.6343 | |
| 192 | A | A | -1.2504 | |
| 193 | K | A | -1.5716 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -2.0829 | |
| 197 | K | A | -2.2679 | |
| 198 | L | A | -0.8571 | |
| 199 | E | A | 0.0000 | |
| 200 | P | A | -1.3201 | |
| 201 | S | A | -1.0651 | |
| 202 | K | A | -2.1164 | |
| 203 | D | A | -1.6760 | |
| 204 | D | A | -1.1703 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.6308 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.2069 | |
| 211 | D | A | -2.6533 | |
| 212 | T | A | -1.8158 | |
| 213 | R | A | -1.6490 | |
| 214 | T | A | 0.0000 | |
| 215 | I | A | 0.0000 | |
| 216 | R | A | -1.7001 | |
| 217 | V | A | 0.0000 | |
| 218 | D | A | -1.3227 | |
| 219 | Y | A | -1.5292 | |
| 220 | E | A | -2.5790 | |
| 221 | G | A | -1.7347 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -2.7558 | |
| 224 | A | A | -1.6526 | |
| 225 | E | A | -1.3742 | |
| 226 | P | A | -0.7455 | |
| 227 | Y | A | -0.2307 | |
| 228 | G | A | -0.6632 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5327 | |
| 231 | M | A | -0.4713 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.4290 | |
| 234 | Y | A | -0.2770 | |
| 235 | N | A | -1.1659 | |
| 236 | E | A | -2.0899 | |
| 237 | K | A | -2.4155 | |
| 238 | E | A | -2.5956 | |
| 239 | S | A | -1.9475 | |
| 240 | S | A | -2.3204 | |
| 241 | K | A | -3.2503 | |
| 242 | D | A | -3.2084 | |
| 243 | S | A | -2.2190 | |
| 244 | E | A | -2.2999 | |
| 245 | K | A | -1.7561 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | K | A | -0.8408 | |
| 249 | A | A | -1.3555 | |
| 250 | G | A | -1.0684 | |
| 251 | P | A | -1.2837 | |
| 252 | D | A | -1.8804 | |
| 253 | L | A | -0.6011 | |
| 254 | E | A | -1.7300 | |
| 255 | P | A | -1.0681 | |
| 256 | L | A | 0.0354 | |
| 257 | P | A | -1.0674 | |
| 258 | D | A | -1.9704 | |
| 259 | E | A | -2.0786 | |
| 260 | P | A | -1.1579 | |
| 261 | P | A | -1.0645 | |
| 262 | P | A | -0.7496 | |
| 263 | S | A | -0.6110 | |
| 264 | P | A | -0.6896 | |
| 265 | L | A | 0.7434 | |
| 266 | Y | A | 0.8052 | |
| 267 | V | A | 0.9209 | |
| 268 | K | A | -0.6267 | |
| 269 | P | A | -0.1642 | |
| 270 | P | A | -0.4696 | |
| 271 | P | A | -0.2803 | |
| 272 | T | A | -0.1524 | |
| 273 | S | A | 0.1916 | |
| 274 | P | A | 0.5737 | |
| 275 | Y | A | 1.2470 | |
| 276 | A | A | 0.7226 | |
| 277 | V | A | 1.4381 | |
| 278 | R | A | 0.0771 | |
| 279 | P | A | -0.4417 | |
| 280 | S | A | -0.9384 | |
| 281 | T | A | -0.5949 | |
| 282 | N | A | -1.0758 | |
| 283 | Y | A | 0.5616 | |
| 284 | F | A | 0.0347 | |
| 285 | T | A | -0.9321 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -2.0888 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.9508 | |
| 291 | E | A | -2.2049 | |
| 292 | I | A | -1.5546 | |
| 293 | T | A | -1.9301 | |
| 294 | E | A | -2.8107 | |
| 295 | D | A | -2.9593 | |
| 296 | D | A | -2.3653 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | -1.3110 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.1458 | |
| 301 | K | A | -1.6017 | |
| 302 | P | A | -0.6077 | |
| 303 | I | A | 0.1729 | |
| 304 | F | A | -0.0774 | |
| 305 | F | A | -0.9624 | |
| 306 | E | A | -2.4538 | |
| 307 | K | A | -2.6339 | |
| 308 | T | A | 0.0000 | |
| 309 | P | A | -1.1630 | |
| 310 | G | A | -0.8786 | |
| 311 | L | A | 0.1166 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -0.9280 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8245 | |
| 319 | N | A | -0.7419 | |
| 320 | Q | A | -0.6450 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.7306 | |
| 331 | S | A | 0.0000 | |
| 332 | E | A | -2.4656 | |
| 333 | I | A | -1.7356 | |
| 334 | E | A | -2.0870 | |
| 335 | T | A | -1.0499 | |
| 336 | I | A | 0.0741 | |
| 337 | R | A | -1.0090 | |
| 338 | T | A | -0.0612 | |
| 339 | R | A | -0.0614 | |
| 340 | I | A | 1.6213 | |
| 341 | S | A | 0.6200 | |
| 342 | T | A | 0.1294 | |
| 343 | P | A | -0.1013 | |
| 344 | A | A | 0.0203 | |
| 345 | I | A | 0.4706 | |
| 346 | D | A | -0.4387 | |
| 347 | V | A | 1.5827 | |
| 348 | Y | A | 1.4735 | |
| 349 | D | A | -0.0195 | |
| 350 | P | A | -0.4594 | |
| 351 | S | A | 0.0280 | |
| 352 | N | A | 0.2608 | |
| 353 | Y | A | 0.6973 | |
| 354 | V | A | 1.2269 | |
| 355 | T | A | -0.2653 | |
| 356 | S | A | -0.6724 | |
| 357 | K | A | -1.7432 | |
| 358 | R | A | -1.4874 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.7875 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1331 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.3609 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | R | A | -0.5768 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.6782 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -0.6431 | |
| 376 | L | A | -0.3111 | |
| 377 | T | A | -0.6481 | |
| 378 | P | A | -0.9741 | |
| 379 | E | A | -1.7894 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -0.6196 | |
| 382 | A | A | -1.0049 | |
| 383 | Y | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | E | A | -1.4196 | |
| 386 | R | A | -1.6091 | |
| 387 | L | A | -0.5774 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -1.0190 | |
| 390 | R | A | -1.2936 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.3080 | |
| 394 | D | A | -1.7894 | |
| 395 | W | A | -1.3004 | |
| 396 | N | A | -1.8461 | |
| 397 | L | A | -1.2083 | |
| 398 | P | A | -1.2486 | |
| 399 | D | A | -1.9153 | |
| 400 | V | A | -0.7769 | |
| 401 | P | A | -0.5218 | |
| 402 | P | A | -0.6502 | |
| 403 | V | A | 0.2516 | |
| 404 | E | A | -1.7331 | |
| 405 | R | A | -1.9876 | |
| 406 | P | A | -1.6343 | |
| 407 | D | A | -2.0287 | |
| 408 | P | A | -1.1505 | |
| 409 | Y | A | 0.0000 | |
| 410 | A | A | -1.1954 | |
| 411 | G | A | -1.3920 | |
| 412 | K | A | -1.9261 | |
| 413 | K | A | -2.4925 | |
| 414 | F | A | -1.6289 | |
| 415 | H | A | -1.5973 | |
| 416 | E | A | -2.5102 | |
| 417 | I | A | -1.8594 | |
| 418 | D | A | -2.7618 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8963 | |
| 421 | D | A | -2.7885 | |
| 422 | K | A | -2.6550 | |
| 423 | L | A | -1.2190 | |
| 424 | S | A | -1.1993 | |
| 425 | S | A | -0.6561 | |
| 426 | D | A | -1.5134 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.6064 | |
| 429 | K | A | -2.6848 | |
| 430 | T | A | -2.1657 | |
| 431 | E | A | -2.4237 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | Q | A | -1.7178 | |
| 435 | L | A | -0.5228 | |
| 436 | Y | A | -0.2053 | |
| 437 | L | A | 0.2715 | |
| 438 | N | A | -1.3981 | |
| 439 | R | A | -1.8392 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine