Project name: query_structure

Status: done

Started: 2026-03-16 22:52:16
Settings
Chain sequence(s) A: ACGILHDNCVYVPAQNPCCRGLQCRYGKCLVQVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:15)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:15)
Show buried residues

Minimal score value
-1.9605
Maximal score value
1.6111
Average score
-0.1315
Total score value
-4.4719

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.3048
2 C A 0.3836
3 G A 0.0000
4 I A 0.4954
5 L A 0.8031
6 H A -1.2335
7 D A -1.7368
8 N A -1.9605
9 C A -0.4162
10 V A 1.2297
11 Y A 1.6111
12 V A 1.0136
13 P A -0.1001
14 A A -0.3277
15 Q A -1.0585
16 N A -0.6590
17 P A -0.4616
18 C A 0.0000
19 C A -0.3271
20 R A -1.9362
21 G A -0.8941
22 L A -0.2283
23 Q A -0.0313
24 C A 0.0000
25 R A -0.7587
26 Y A 0.9644
27 G A -0.5839
28 K A -1.3610
29 C A 0.0000
30 L A 0.3551
31 V A 0.6162
32 Q A -0.0390
33 V A 1.4093
34 S A 0.4553
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Laboratory of Theory of Biopolymers 2018