| Chain sequence(s) |
A: ACGILHDNCVYVPAQNPCCRGLQCRYGKCLVQVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:15)
[INFO] Main: Simulation completed successfully. (00:00:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.3048 | |
| 2 | C | A | 0.3836 | |
| 3 | G | A | 0.0000 | |
| 4 | I | A | 0.4954 | |
| 5 | L | A | 0.8031 | |
| 6 | H | A | -1.2335 | |
| 7 | D | A | -1.7368 | |
| 8 | N | A | -1.9605 | |
| 9 | C | A | -0.4162 | |
| 10 | V | A | 1.2297 | |
| 11 | Y | A | 1.6111 | |
| 12 | V | A | 1.0136 | |
| 13 | P | A | -0.1001 | |
| 14 | A | A | -0.3277 | |
| 15 | Q | A | -1.0585 | |
| 16 | N | A | -0.6590 | |
| 17 | P | A | -0.4616 | |
| 18 | C | A | 0.0000 | |
| 19 | C | A | -0.3271 | |
| 20 | R | A | -1.9362 | |
| 21 | G | A | -0.8941 | |
| 22 | L | A | -0.2283 | |
| 23 | Q | A | -0.0313 | |
| 24 | C | A | 0.0000 | |
| 25 | R | A | -0.7587 | |
| 26 | Y | A | 0.9644 | |
| 27 | G | A | -0.5839 | |
| 28 | K | A | -1.3610 | |
| 29 | C | A | 0.0000 | |
| 30 | L | A | 0.3551 | |
| 31 | V | A | 0.6162 | |
| 32 | Q | A | -0.0390 | |
| 33 | V | A | 1.4093 | |
| 34 | S | A | 0.4553 |