Project name: query_structure

Status: done

Started: 2026-03-16 23:14:03
Settings
Chain sequence(s) A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYSMSWVRLAPGKALEWVSVINSGGDATYYADSVKGRFTISRDNAKNMLYLQMNSLKPVDTAMYYCVTGLYMSTGPVVAVPFGYWGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-2.4853
Maximal score value
2.8823
Average score
-0.2699
Total score value
-33.7326

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.0705
2 V A -1.0251
3 Q A -0.9874
4 L A 0.0000
5 V A 1.0020
6 E A 0.0000
7 S A -0.6294
8 G A -1.0539
9 G A -0.8580
10 G A -0.1012
11 L A 0.9126
12 V A 0.0000
13 Q A -1.4144
14 P A -1.2651
15 G A -1.4754
16 G A -1.0167
17 S A -1.4500
18 L A -1.1094
19 R A -2.3010
20 L A 0.0000
21 S A -0.3766
22 C A 0.0000
23 A A -0.0256
24 A A 0.0000
25 S A -0.7932
26 G A -1.2089
27 F A -0.4165
28 T A -0.1688
29 F A 0.0000
30 S A -0.5428
31 T A 0.0958
32 Y A 0.5303
33 S A 0.0000
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 L A 0.3850
40 A A -0.1560
41 P A -0.5340
42 G A -1.2078
43 K A -1.6587
44 A A -0.2875
45 L A 0.8072
46 E A 0.1569
47 W A 0.3525
48 V A 0.0000
49 S A 0.0000
50 V A 0.0000
51 I A 0.0000
52 N A -0.3885
53 S A -0.5102
54 G A -1.3822
55 G A -1.6190
56 D A -2.1208
57 A A -0.8538
58 T A -0.0086
59 Y A 0.5990
60 Y A -0.3793
61 A A 0.0000
62 D A -2.2833
63 S A -1.3617
64 V A 0.0000
65 K A -2.4853
66 G A -1.8618
67 R A -1.6012
68 F A 0.0000
69 T A -0.9361
70 I A 0.0000
71 S A -0.5894
72 R A -1.1666
73 D A -1.4828
74 N A -1.6963
75 A A -1.3586
76 K A -2.1791
77 N A -1.5775
78 M A -0.7958
79 L A 0.0000
80 Y A -0.5842
81 L A 0.0000
82 Q A -1.6129
83 M A 0.0000
84 N A -1.9669
85 S A -1.4115
86 L A 0.0000
87 K A -1.1683
88 P A -0.2411
89 V A 1.2188
90 D A 0.0000
91 T A 0.3149
92 A A 0.0000
93 M A -0.0278
94 Y A 0.0000
95 Y A 0.3196
96 C A 0.0000
97 V A 0.0000
98 T A 0.0000
99 G A 1.0633
100 L A 1.5663
101 Y A 2.0949
102 M A 1.5278
103 S A 0.6678
104 T A 0.0773
105 G A 0.1648
106 P A 0.8829
107 V A 2.6960
108 V A 2.8823
109 A A 1.8393
110 V A 1.9603
111 P A 0.8521
112 F A 1.2963
113 G A 0.8537
114 Y A 0.8357
115 W A 0.8088
116 G A 0.1222
117 Q A -0.8458
118 G A 0.0000
119 T A 0.0000
120 Q A -1.0744
121 V A 0.0000
122 T A 0.0446
123 V A 0.0000
124 S A -0.4133
125 S A -0.5456
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Laboratory of Theory of Biopolymers 2018