| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYSMSWVRLAPGKALEWVSVINSGGDATYYADSVKGRFTISRDNAKNMLYLQMNSLKPVDTAMYYCVTGLYMSTGPVVAVPFGYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.0705 | |
| 2 | V | A | -1.0251 | |
| 3 | Q | A | -0.9874 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.0020 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.6294 | |
| 8 | G | A | -1.0539 | |
| 9 | G | A | -0.8580 | |
| 10 | G | A | -0.1012 | |
| 11 | L | A | 0.9126 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.4144 | |
| 14 | P | A | -1.2651 | |
| 15 | G | A | -1.4754 | |
| 16 | G | A | -1.0167 | |
| 17 | S | A | -1.4500 | |
| 18 | L | A | -1.1094 | |
| 19 | R | A | -2.3010 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3766 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.0256 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.7932 | |
| 26 | G | A | -1.2089 | |
| 27 | F | A | -0.4165 | |
| 28 | T | A | -0.1688 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -0.5428 | |
| 31 | T | A | 0.0958 | |
| 32 | Y | A | 0.5303 | |
| 33 | S | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | S | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | L | A | 0.3850 | |
| 40 | A | A | -0.1560 | |
| 41 | P | A | -0.5340 | |
| 42 | G | A | -1.2078 | |
| 43 | K | A | -1.6587 | |
| 44 | A | A | -0.2875 | |
| 45 | L | A | 0.8072 | |
| 46 | E | A | 0.1569 | |
| 47 | W | A | 0.3525 | |
| 48 | V | A | 0.0000 | |
| 49 | S | A | 0.0000 | |
| 50 | V | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -0.3885 | |
| 53 | S | A | -0.5102 | |
| 54 | G | A | -1.3822 | |
| 55 | G | A | -1.6190 | |
| 56 | D | A | -2.1208 | |
| 57 | A | A | -0.8538 | |
| 58 | T | A | -0.0086 | |
| 59 | Y | A | 0.5990 | |
| 60 | Y | A | -0.3793 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.2833 | |
| 63 | S | A | -1.3617 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.4853 | |
| 66 | G | A | -1.8618 | |
| 67 | R | A | -1.6012 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9361 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.5894 | |
| 72 | R | A | -1.1666 | |
| 73 | D | A | -1.4828 | |
| 74 | N | A | -1.6963 | |
| 75 | A | A | -1.3586 | |
| 76 | K | A | -2.1791 | |
| 77 | N | A | -1.5775 | |
| 78 | M | A | -0.7958 | |
| 79 | L | A | 0.0000 | |
| 80 | Y | A | -0.5842 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6129 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.9669 | |
| 85 | S | A | -1.4115 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -1.1683 | |
| 88 | P | A | -0.2411 | |
| 89 | V | A | 1.2188 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | 0.3149 | |
| 92 | A | A | 0.0000 | |
| 93 | M | A | -0.0278 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.3196 | |
| 96 | C | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | T | A | 0.0000 | |
| 99 | G | A | 1.0633 | |
| 100 | L | A | 1.5663 | |
| 101 | Y | A | 2.0949 | |
| 102 | M | A | 1.5278 | |
| 103 | S | A | 0.6678 | |
| 104 | T | A | 0.0773 | |
| 105 | G | A | 0.1648 | |
| 106 | P | A | 0.8829 | |
| 107 | V | A | 2.6960 | |
| 108 | V | A | 2.8823 | |
| 109 | A | A | 1.8393 | |
| 110 | V | A | 1.9603 | |
| 111 | P | A | 0.8521 | |
| 112 | F | A | 1.2963 | |
| 113 | G | A | 0.8537 | |
| 114 | Y | A | 0.8357 | |
| 115 | W | A | 0.8088 | |
| 116 | G | A | 0.1222 | |
| 117 | Q | A | -0.8458 | |
| 118 | G | A | 0.0000 | |
| 119 | T | A | 0.0000 | |
| 120 | Q | A | -1.0744 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | 0.0446 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -0.4133 | |
| 125 | S | A | -0.5456 |