| Chain sequence(s) |
A: GSARDDVLIGDAGANWLFGLAGNDVLSGGAGDDLLEGDEGSDLLSGDAGNDALTGGQGDDTYLFGVGYGHDDIAESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.2716 | |
| 2 | S | A | -0.7602 | |
| 3 | A | A | -1.5422 | |
| 4 | R | A | -2.8292 | |
| 5 | D | A | -2.7673 | |
| 6 | D | A | -0.5176 | |
| 7 | V | A | 1.7811 | |
| 8 | L | A | 2.0590 | |
| 9 | I | A | 2.1845 | |
| 10 | G | A | 0.1978 | |
| 11 | D | A | -1.4725 | |
| 12 | A | A | -1.2403 | |
| 13 | G | A | -1.1269 | |
| 14 | A | A | -0.9831 | |
| 15 | N | A | 0.0366 | |
| 16 | W | A | 1.1262 | |
| 17 | L | A | 1.3493 | |
| 18 | F | A | 0.8483 | |
| 19 | G | A | 0.0000 | |
| 20 | L | A | -0.5025 | |
| 21 | A | A | -1.6466 | |
| 22 | G | A | -2.5001 | |
| 23 | N | A | -2.4663 | |
| 24 | D | A | 0.0000 | |
| 25 | V | A | 1.2645 | |
| 26 | L | A | 0.0000 | |
| 27 | S | A | 1.0499 | |
| 28 | G | A | 0.0000 | |
| 29 | G | A | -0.6455 | |
| 30 | A | A | -1.2607 | |
| 31 | G | A | -1.7190 | |
| 32 | D | A | -2.3353 | |
| 33 | D | A | 0.0000 | |
| 34 | L | A | 0.1556 | |
| 35 | L | A | 0.0000 | |
| 36 | E | A | -0.1322 | |
| 37 | G | A | 0.0000 | |
| 38 | D | A | -1.5996 | |
| 39 | E | A | -2.7195 | |
| 40 | G | A | -2.5738 | |
| 41 | S | A | -2.0955 | |
| 42 | D | A | 0.0000 | |
| 43 | L | A | 0.4969 | |
| 44 | L | A | 0.0000 | |
| 45 | S | A | 0.0000 | |
| 46 | G | A | 0.0000 | |
| 47 | D | A | -0.6068 | |
| 48 | A | A | -0.7167 | |
| 49 | G | A | -1.6897 | |
| 50 | N | A | -2.2989 | |
| 51 | D | A | 0.0000 | |
| 52 | A | A | -0.6252 | |
| 53 | L | A | 0.0000 | |
| 54 | T | A | -0.4112 | |
| 55 | G | A | 0.0000 | |
| 56 | G | A | 0.0000 | |
| 57 | Q | A | -2.7107 | |
| 58 | G | A | -2.6392 | |
| 59 | D | A | -2.8601 | |
| 60 | D | A | 0.0000 | |
| 61 | T | A | -0.4852 | |
| 62 | Y | A | 0.0000 | |
| 63 | L | A | -0.5512 | |
| 64 | F | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | V | A | 1.0122 | |
| 67 | G | A | 0.0422 | |
| 68 | Y | A | -0.2463 | |
| 69 | G | A | -1.2762 | |
| 70 | H | A | -1.7839 | |
| 71 | D | A | 0.0000 | |
| 72 | D | A | -0.8618 | |
| 73 | I | A | 0.0000 | |
| 74 | A | A | -0.5134 | |
| 75 | E | A | 0.0000 | |
| 76 | S | A | -1.3421 | |
| 77 | G | A | -2.1055 | |
| 78 | G | A | -2.2200 | |
| 79 | G | A | -2.4841 | |
| 80 | H | A | -2.2531 | |
| 81 | D | A | 0.0000 | |
| 82 | T | A | -1.2877 | |
| 83 | I | A | 0.0000 | |
| 84 | R | A | -2.0256 | |
| 85 | I | A | 0.0000 | |
| 86 | N | A | -1.4545 | |
| 87 | A | A | 0.0000 | |
| 88 | G | A | -1.7646 | |
| 89 | A | A | -1.7458 | |
| 90 | D | A | -2.2213 | |
| 91 | Q | A | -1.8897 | |
| 92 | L | A | 0.0000 | |
| 93 | W | A | -0.3263 | |
| 94 | F | A | 0.0000 | |
| 95 | A | A | -1.7461 | |
| 96 | R | A | -3.2010 | |
| 97 | Q | A | -2.8749 | |
| 98 | G | A | -2.5452 | |
| 99 | N | A | -3.2069 | |
| 100 | D | A | -2.7378 | |
| 101 | L | A | 0.0000 | |
| 102 | E | A | -1.4889 | |
| 103 | I | A | 0.0000 | |
| 104 | R | A | -0.8091 | |
| 105 | I | A | 0.0000 | |
| 106 | L | A | -0.2379 | |
| 107 | G | A | -0.5027 | |
| 108 | T | A | -0.7981 | |
| 109 | D | A | -1.7670 | |
| 110 | D | A | 0.0000 | |
| 111 | A | A | -0.8398 | |
| 112 | L | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | V | A | 0.0000 | |
| 115 | H | A | -1.6718 | |
| 116 | D | A | -2.6401 | |
| 117 | W | A | 0.0000 | |
| 118 | Y | A | -2.5037 | |
| 119 | R | A | -3.1919 | |
| 120 | D | A | -2.5237 | |
| 121 | A | A | -1.9883 | |
| 122 | D | A | -2.9435 | |
| 123 | H | A | -2.3937 | |
| 124 | R | A | -2.1351 | |
| 125 | V | A | 0.0000 | |
| 126 | E | A | -2.1798 | |
| 127 | I | A | -1.2521 | |
| 128 | I | A | 0.0000 | |
| 129 | H | A | -1.7391 | |
| 130 | A | A | 0.0000 | |
| 131 | A | A | -1.6835 | |
| 132 | N | A | -2.1209 | |
| 133 | Q | A | -1.9685 | |
| 134 | A | A | -1.2572 | |
| 135 | V | A | -1.2047 | |
| 136 | D | A | -2.1625 | |
| 137 | Q | A | -1.7495 | |
| 138 | A | A | -1.4016 | |
| 139 | G | A | -1.6136 | |
| 140 | I | A | 0.0000 | |
| 141 | E | A | -2.7234 | |
| 142 | K | A | -2.6585 | |
| 143 | L | A | -1.2743 | |
| 144 | V | A | 0.0000 | |
| 145 | E | A | -2.8346 | |
| 146 | A | A | -1.3800 | |
| 147 | M | A | -1.0115 | |
| 148 | A | A | -1.1116 | |
| 149 | Q | A | -1.1339 | |
| 150 | Y | A | 0.0049 | |
| 151 | P | A | -0.7475 | |
| 152 | D | A | -1.6864 |