Project name: FGKGHGF20

Status: done

Started: 2026-02-20 07:31:16
Settings
Chain sequence(s) A: FGKGHGF
C: FGKGHGF
B: FGKGHGF
E: FGKGHGF
D: FGKGHGF
G: FGKGHGF
F: FGKGHGF
I: FGKGHGF
H: FGKGHGF
K: FGKGHGF
J: FGKGHGF
M: FGKGHGF
L: FGKGHGF
O: FGKGHGF
N: FGKGHGF
Q: FGKGHGF
P: FGKGHGF
S: FGKGHGF
R: FGKGHGF
T: FGKGHGF
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:15:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:15:28)
Show buried residues

Minimal score value
-1.9678
Maximal score value
4.5702
Average score
0.1674
Total score value
23.4346

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 1.6326
2 G A -0.3693
3 K A -1.6103
4 G A 0.0000
5 H A -1.1519
6 G A 0.0000
7 F A -0.1095
1 F B 1.4804
2 G B -0.8725
3 K B -1.7553
4 G B 0.0000
5 H B -1.0546
6 G B 0.0000
7 F B 0.4632
1 F C 0.2360
2 G C -0.8763
3 K C -1.2372
4 G C 0.0000
5 H C 0.9617
6 G C 0.0000
7 F C 0.9539
1 F D 3.1754
2 G D 0.7535
3 K D -0.4329
4 G D 0.0000
5 H D 0.0000
6 G D 0.0000
7 F D 2.1727
1 F E 4.1135
2 G E 1.4798
3 K E 0.0722
4 G E 0.0000
5 H E -0.2175
6 G E 0.0000
7 F E 0.0000
1 F F 4.1305
2 G F 0.0000
3 K F -0.7839
4 G F 0.0000
5 H F 0.3741
6 G F 0.0000
7 F F 0.0000
1 F G 4.0424
2 G G 0.0000
3 K G -1.1927
4 G G 0.0000
5 H G -0.7887
6 G G 0.0000
7 F G 2.2442
1 F H 4.5702
2 G H 0.0000
3 K H -0.1668
4 G H 0.0000
5 H H -1.1696
6 G H 0.0000
7 F H 2.1842
1 F I 3.9282
2 G I 1.6735
3 K I -1.0139
4 G I -1.3036
5 H I -1.6029
6 G I 0.0000
7 F I 1.9379
1 F J 1.6526
2 G J -0.0423
3 K J -0.7006
4 G J -0.7160
5 H J -0.6860
6 G J 0.0000
7 F J 1.2138
1 F K 1.2694
2 G K -0.5994
3 K K -1.7861
4 G K -1.2855
5 H K -1.2560
6 G K 0.0307
7 F K 0.0000
1 F L 1.0651
2 G L -1.1118
3 K L -1.8221
4 G L -1.2289
5 H L -0.7672
6 G L 0.0000
7 F L 0.0000
1 F M 1.2494
2 G M -0.7782
3 K M -1.8960
4 G M -1.3745
5 H M -0.5812
6 G M 0.0000
7 F M 1.6773
1 F N 2.1651
2 G N 0.1778
3 K N -0.7700
4 G N -1.2248
5 H N 0.0000
6 G N -0.0217
7 F N 0.0000
1 F O 2.6719
2 G O 0.7971
3 K O -0.3272
4 G O 0.0000
5 H O -0.6042
6 G O 0.0000
7 F O 1.5047
1 F P 2.6742
2 G P 0.0000
3 K P -0.6642
4 G P -0.8696
5 H P -0.3157
6 G P 0.0000
7 F P 0.0000
1 F Q 3.3119
2 G Q 0.8514
3 K Q -0.6657
4 G Q 0.0000
5 H Q -1.5390
6 G Q 0.0000
7 F Q 0.4729
1 F R 3.3028
2 G R 0.5789
3 K R -1.1449
4 G R -1.3953
5 H R -1.6333
6 G R 0.0000
7 F R 0.9373
1 F S 2.6449
2 G S 0.0000
3 K S -1.9678
4 G S 0.0000
5 H S -0.7800
6 G S 0.0000
7 F S 0.0000
1 F T 2.0974
2 G T -0.1841
3 K T -1.3431
4 G T -0.9905
5 H T -0.7098
6 G T 0.0000
7 F T 0.0000
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Laboratory of Theory of Biopolymers 2018