| Chain sequence(s) |
A: CGGVQAEEQKLISEEDLLRKRREQLKHKLEQL
B: CGGMRRKNDTHQQDIDDLKRQNALLEQQVRAL input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:48)
[INFO] Main: Simulation completed successfully. (00:03:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | C | A | 0.3761 | |
| 4 | G | A | -0.6450 | |
| 5 | G | A | -1.3058 | |
| 6 | V | A | 0.0000 | |
| 7 | Q | A | -2.1851 | |
| 8 | A | A | -2.2075 | |
| 9 | E | A | -2.6229 | |
| 10 | E | A | -2.7586 | |
| 11 | Q | A | -2.9087 | |
| 12 | K | A | -3.3086 | |
| 13 | L | A | -2.4573 | |
| 14 | I | A | -1.4638 | |
| 15 | S | A | -1.6458 | |
| 16 | E | A | -2.4229 | |
| 17 | E | A | 0.0000 | |
| 18 | D | A | -2.1743 | |
| 19 | L | A | -1.3449 | |
| 20 | L | A | -3.1551 | |
| 21 | R | A | -3.7742 | |
| 22 | K | A | -3.9307 | |
| 23 | R | A | -4.5221 | |
| 24 | R | A | -4.6009 | |
| 25 | E | A | -5.0842 | |
| 26 | Q | A | -4.6307 | |
| 27 | L | A | -4.0287 | |
| 28 | K | A | -3.9223 | |
| 29 | H | A | -4.0127 | |
| 30 | K | A | -2.7900 | |
| 31 | L | A | -1.9269 | |
| 32 | E | A | -3.0569 | |
| 33 | Q | A | -2.0927 | |
| 34 | L | A | 0.0818 | |
| 3 | C | B | 0.6200 | |
| 4 | G | B | -0.5894 | |
| 5 | G | B | -1.5188 | |
| 6 | M | B | -1.6574 | |
| 7 | R | B | -3.1637 | |
| 8 | R | B | -3.4681 | |
| 9 | K | B | -2.9858 | |
| 10 | N | B | 0.0000 | |
| 11 | D | B | -3.0703 | |
| 12 | T | B | -2.8994 | |
| 13 | H | B | -3.2110 | |
| 14 | Q | B | -3.4593 | |
| 15 | Q | B | -3.8196 | |
| 16 | D | B | -4.0922 | |
| 17 | I | B | -3.9520 | |
| 18 | D | B | -4.7639 | |
| 19 | D | B | -4.7875 | |
| 20 | L | B | 0.0000 | |
| 21 | K | B | -4.1925 | |
| 22 | R | B | -3.7257 | |
| 23 | Q | B | -2.5752 | |
| 24 | N | B | 0.0000 | |
| 25 | A | B | -1.5997 | |
| 26 | L | B | -0.4602 | |
| 27 | L | B | -1.4667 | |
| 28 | E | B | -2.3947 | |
| 29 | Q | B | -2.0464 | |
| 30 | Q | B | -1.6566 | |
| 31 | V | B | -1.2492 | |
| 32 | R | B | -2.1100 | |
| 33 | A | B | -0.8529 | |
| 34 | L | B | 0.6097 |