Project name: poonia

Status: done

Started: 2025-02-04 13:49:59
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Chain sequence(s) A: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
C: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
B: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
E: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
D: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
G: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
F: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
I: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
H: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
K: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
J: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
L: GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:09:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:09:27)
Show buried residues

Minimal score value
-3.2848
Maximal score value
4.0673
Average score
0.1452
Total score value
55.7479

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
9 G A -0.1374
10 Y A 0.3818
11 E A -0.8936
12 V A -0.3215
13 H A -1.6882
14 H A -2.6532
15 Q A -3.1500
16 K A -2.7189
17 L A -0.3611
18 V A 1.4583
19 F A 2.2249
20 F A 2.2197
21 A A 0.2887
22 E A -1.2570
23 D A -0.7408
24 V A 0.5874
25 G A -0.8447
26 S A -1.4604
27 N A -2.5082
28 K A -3.2848
29 G A -1.6649
30 A A -0.4597
31 I A 1.7076
32 I A 2.5873
33 G A 2.2532
34 L A 2.8544
35 M A 3.0158
36 V A 3.0975
37 G A 2.3562
38 G A 2.0215
39 V A 3.3808
40 V A 2.7965
9 G B -0.1039
10 Y B 0.8828
11 E B 0.0128
12 V B -0.1645
13 H B -1.3588
14 H B -2.1293
15 Q B -2.9610
16 K B -2.3923
17 L B 0.0000
18 V B 0.0000
19 F B 0.0000
20 F B 1.7227
21 A B -0.0187
22 E B -0.8395
23 D B 0.0000
24 V B 1.1302
25 G B -0.5599
26 S B -1.6030
27 N B -2.7191
28 K B -3.2429
29 G B -1.5292
30 A B -0.8023
31 I B 1.3167
32 I B 1.9751
33 G B 1.8992
34 L B 2.1331
35 M B 0.0000
36 V B 2.4466
37 G B 0.0000
38 G B 2.7146
39 V B 4.0673
40 V B 3.5328
9 G C 0.1496
10 Y C 0.8610
11 E C -0.0542
12 V C 0.0549
13 H C -0.7339
14 H C -1.4647
15 Q C -1.7808
16 K C -1.8037
17 L C 0.0000
18 V C 0.4581
19 F C 0.0000
20 F C 0.9981
21 A C -0.1521
22 E C -0.4945
23 D C 0.0000
24 V C 1.3812
25 G C 0.3195
26 S C -0.7086
27 N C -1.8561
28 K C -1.6073
29 G C -0.9415
30 A C 0.0000
31 I C 0.0000
32 I C 0.9165
33 G C 0.0000
34 L C 0.0000
35 M C 0.0000
36 V C 1.2205
37 G C 0.0000
38 G C 2.2822
39 V C 3.9495
40 V C 3.9569
9 G D -0.1371
10 Y D 0.6995
11 E D -0.1876
12 V D 0.1035
13 H D -0.9794
14 H D -1.3286
15 Q D -1.6782
16 K D -1.4782
17 L D 0.0000
18 V D 0.8613
19 F D 0.0000
20 F D 1.3315
21 A D -0.1825
22 E D -0.7082
23 D D -0.3419
24 V D 1.2718
25 G D 0.2641
26 S D 0.0000
27 N D 0.0000
28 K D 0.0000
29 G D -0.1590
30 A D 0.0000
31 I D 0.3238
32 I D 0.0000
33 G D 0.2270
34 L D 0.0000
35 M D 0.0000
36 V D 0.5232
37 G D 0.0000
38 G D 1.3168
39 V D 3.0098
40 V D 3.3221
9 G E -0.7651
10 Y E -0.6054
11 E E -1.6341
12 V E -0.8554
13 H E -1.4372
14 H E -1.7352
15 Q E -1.7918
16 K E -1.4337
17 L E 0.3942
18 V E 1.8927
19 F E 2.7578
20 F E 1.9972
21 A E 0.0382
22 E E -1.1884
23 D E -1.4846
24 V E -0.3939
25 G E -0.9998
26 S E -0.7935
27 N E -1.6998
28 K E -1.6967
29 G E -0.9847
30 A E 0.0000
31 I E 0.0000
32 I E 0.9684
33 G E 0.0000
34 L E 0.0000
35 M E 0.0000
36 V E 0.4761
37 G E 0.0000
38 G E 1.3733
39 V E 2.6802
40 V E 2.8821
9 G F -0.1492
10 Y F 0.0777
11 E F -1.6465
12 V F -0.9922
13 H F -1.7446
14 H F -2.1532
15 Q F -2.4074
16 K F -1.6881
17 L F 1.1767
18 V F 2.5400
19 F F 3.7677
20 F F 2.5102
21 A F 0.2367
22 E F -1.8041
23 D F -2.0236
24 V F 0.0580
25 G F -0.2859
26 S F -0.4864
27 N F -1.5323
28 K F 0.0000
29 G F -0.7621
30 A F -0.5099
31 I F 0.6699
32 I F 1.4873
33 G F 1.0740
34 L F 1.1619
35 M F 0.8492
36 V F 0.6667
37 G F 0.5052
38 G F 1.1592
39 V F 1.8898
40 V F 1.7379
9 G G -0.1724
10 Y G 0.1774
11 E G -1.1966
12 V G -0.9147
13 H G -1.8522
14 H G -2.4949
15 Q G -2.7960
16 K G -2.2427
17 L G 0.3517
18 V G 2.1004
19 F G 2.3945
20 F G 2.5518
21 A G 1.0135
22 E G -0.1132
23 D G 0.2362
24 V G 0.9590
25 G G -0.4463
26 S G -0.8994
27 N G -2.2708
28 K G -3.0332
29 G G -1.9343
30 A G -0.1343
31 I G 2.1191
32 I G 3.1954
33 G G 2.7214
34 L G 2.6036
35 M G 2.3837
36 V G 2.3760
37 G G 1.5412
38 G G 1.8430
39 V G 3.0067
40 V G 3.0018
9 G H -0.0906
10 Y H 0.7502
11 E H -0.0616
12 V H -0.3643
13 H H -0.8198
14 H H 0.0000
15 Q H -2.1458
16 K H -1.9207
17 L H -0.1489
18 V H 1.2780
19 F H 0.0000
20 F H 1.6587
21 A H 0.4597
22 E H -0.3638
23 D H 0.0000
24 V H 0.1216
25 G H -0.9045
26 S H -1.2990
27 N H -2.1986
28 K H -2.5778
29 G H -0.7785
30 A H -0.2439
31 I H 0.0000
32 I H 2.0872
33 G H 0.0000
34 L H 2.0152
35 M H 0.0000
36 V H 1.6048
37 G H 0.0000
38 G H 1.7239
39 V H 3.0414
40 V H 3.3447
9 G I 0.1841
10 Y I 1.2077
11 E I 0.6290
12 V I 0.2880
13 H I -1.1628
14 H I -1.9834
15 Q I -1.9292
16 K I -1.8564
17 L I -0.1712
18 V I 0.0000
19 F I 0.0000
20 F I 0.9132
21 A I 0.0000
22 E I -1.1430
23 D I -0.8748
24 V I 0.2980
25 G I -0.4425
26 S I -1.2125
27 N I -2.0455
28 K I 0.0000
29 G I -0.7181
30 A I 0.0000
31 I I 0.7385
32 I I 1.0200
33 G I 0.0000
34 L I 0.8967
35 M I 0.0000
36 V I 0.6695
37 G I 0.0000
38 G I 1.3831
39 V I 3.0827
40 V I 3.3993
9 G J 0.3232
10 Y J 1.3578
11 E J 0.8103
12 V J 1.0282
13 H J -0.4225
14 H J -1.7289
15 Q J -1.7943
16 K J -1.7093
17 L J 0.0672
18 V J 0.8098
19 F J 1.7105
20 F J 1.0594
21 A J 0.0000
22 E J -1.1732
23 D J -0.9769
24 V J -0.2651
25 G J -0.6751
26 S J -1.0825
27 N J -1.9930
28 K J 0.0000
29 G J 0.1020
30 A J 0.0000
31 I J 0.4822
32 I J 0.0000
33 G J 0.0000
34 L J 0.0000
35 M J 0.0000
36 V J 0.0000
37 G J 0.0000
38 G J 0.9763
39 V J 2.4584
40 V J 3.0710
9 G K 0.0774
10 Y K 1.2880
11 E K 0.6477
12 V K 0.7479
13 H K -0.6669
14 H K -1.5506
15 Q K -1.9112
16 K K -1.4751
17 L K 0.6511
18 V K 1.9116
19 F K 2.8526
20 F K 1.8538
21 A K 0.0587
22 E K -1.1144
23 D K -0.8851
24 V K 0.7729
25 G K -0.0049
26 S K -0.9617
27 N K -1.3598
28 K K -1.2196
29 G K -0.5409
30 A K 0.0000
31 I K 0.5055
32 I K 0.6700
33 G K 0.5264
34 L K 0.0000
35 M K 0.0000
36 V K 0.0000
37 G K 0.0000
38 G K 0.9355
39 V K 2.2812
40 V K 2.7073
9 G L -0.1689
10 Y L 0.8176
11 E L -0.1840
12 V L 0.8370
13 H L -0.9168
14 H L -1.7995
15 Q L -2.0409
16 K L -1.6883
17 L L 1.2973
18 V L 2.5925
19 F L 3.7106
20 F L 2.2189
21 A L 0.1569
22 E L -1.6034
23 D L -2.4774
24 V L -1.9154
25 G L -1.3997
26 S L -0.7002
27 N L -0.9458
28 K L -1.3595
29 G L -0.0809
30 A L -0.2944
31 I L 0.0994
32 I L 0.4814
33 G L 0.7023
34 L L 0.6125
35 M L 0.6795
36 V L 0.7089
37 G L 0.6787
38 G L 1.3410
39 V L 2.6068
40 V L 2.2709
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Laboratory of Theory of Biopolymers 2018