| Chain sequence(s) |
H: EVQLVESGGALVKPGGSLRLSCAASGFTFSKAWMSWVRQAPGKGLEWVGRIKSVTDGETTDYAAPVKGRFTISRDDSKSTLYLQMNSLKTEDTAVYYCTSSFCCRGGSCPSHDTSYCGGQYKSYYYMDVWGKGTTVTVSS
L: QSVLTQPPSASGTPGQRVTISCSGSSSNIGSSSVSWYQQLPGTAPKLLIYKNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCSTWDDSLSVRVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7012 | |
| 2 | V | H | -0.4669 | |
| 3 | Q | H | -1.1356 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | -0.0460 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.5575 | |
| 8 | G | H | -0.6501 | |
| 9 | G | H | -0.1331 | |
| 11 | A | H | 0.6889 | |
| 12 | L | H | 1.2010 | |
| 13 | V | H | -0.2189 | |
| 14 | K | H | -1.8488 | |
| 15 | P | H | -2.0516 | |
| 16 | G | H | -1.5950 | |
| 17 | G | H | -1.3000 | |
| 18 | S | H | -1.2249 | |
| 19 | L | H | -0.7548 | |
| 20 | R | H | -1.5646 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3805 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.3349 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8035 | |
| 27 | G | H | -0.8337 | |
| 28 | F | H | -0.4315 | |
| 29 | T | H | -0.5357 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7003 | |
| 36 | K | H | -1.3972 | |
| 37 | A | H | 0.0000 | |
| 38 | W | H | -0.0950 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7617 | |
| 45 | A | H | -1.1796 | |
| 46 | P | H | -0.9642 | |
| 47 | G | H | -1.4582 | |
| 48 | K | H | -2.2418 | |
| 49 | G | H | -1.4761 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8856 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.3854 | |
| 56 | I | H | 0.0000 | |
| 57 | K | H | -0.6644 | |
| 58 | S | H | 0.0000 | |
| 59 | V | H | 0.7363 | |
| 60 | T | H | -0.0895 | |
| 61 | D | H | -0.6608 | |
| 62 | G | H | -0.4455 | |
| 63 | E | H | -0.4891 | |
| 64 | T | H | -0.4970 | |
| 65 | T | H | -0.4750 | |
| 66 | D | H | -0.5757 | |
| 67 | Y | H | -0.5794 | |
| 68 | A | H | 0.0000 | |
| 69 | A | H | -0.4849 | |
| 70 | P | H | -0.9780 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -1.8754 | |
| 74 | G | H | -1.4540 | |
| 75 | R | H | -1.3725 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8694 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.4680 | |
| 80 | R | H | -0.6460 | |
| 81 | D | H | -1.2211 | |
| 82 | D | H | -1.3689 | |
| 83 | S | H | -1.4060 | |
| 84 | K | H | -2.1250 | |
| 85 | S | H | -1.3186 | |
| 86 | T | H | -0.8384 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4001 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1138 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3386 | |
| 93 | S | H | -1.4081 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.8258 | |
| 96 | T | H | -2.0991 | |
| 97 | E | H | -2.4694 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7370 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0790 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | S | H | 0.0000 | |
| 107 | S | H | 0.0000 | |
| 108 | F | H | 0.3778 | |
| 109 | C | H | -0.1504 | |
| 110 | C | H | -0.5792 | |
| 111 | R | H | -2.2687 | |
| 111A | G | H | -1.4958 | |
| 111B | G | H | -1.3207 | |
| 111C | S | H | -0.6751 | |
| 111D | C | H | -0.2340 | |
| 111E | P | H | -0.8424 | |
| 111F | S | H | -1.2490 | |
| 111G | H | H | -1.8533 | |
| 111H | D | H | -2.1234 | |
| 111I | T | H | -0.8866 | |
| 112I | S | H | -0.1246 | |
| 112H | Y | H | 0.7946 | |
| 112G | C | H | 0.6936 | |
| 112F | G | H | -0.2337 | |
| 112E | G | H | -0.7772 | |
| 112D | Q | H | -1.6010 | |
| 112C | Y | H | -0.6962 | |
| 112B | K | H | -1.4648 | |
| 112A | S | H | -0.6394 | |
| 112 | Y | H | -0.1090 | |
| 113 | Y | H | 0.4231 | |
| 114 | Y | H | 0.0000 | |
| 115 | M | H | 0.0000 | |
| 116 | D | H | -0.0474 | |
| 117 | V | H | 0.0622 | |
| 118 | W | H | -0.4052 | |
| 119 | G | H | 0.0000 | |
| 120 | K | H | -1.6097 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | 0.0061 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1121 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9697 | |
| 128 | S | H | -0.7015 | |
| 1 | Q | L | -1.0538 | |
| 2 | S | L | -0.4767 | |
| 3 | V | L | 0.3709 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3549 | |
| 6 | Q | L | -0.4130 | |
| 7 | P | L | -0.5780 | |
| 8 | P | L | -0.7848 | |
| 9 | S | L | -0.7831 | |
| 11 | A | L | -0.5258 | |
| 12 | S | L | -0.3565 | |
| 13 | G | L | 0.0000 | |
| 14 | T | L | -0.3785 | |
| 15 | P | L | -1.1135 | |
| 16 | G | L | -1.8171 | |
| 17 | Q | L | -2.4403 | |
| 18 | R | L | -2.6116 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.5764 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.3737 | |
| 23 | C | L | 0.0000 | |
| 24 | S | L | -0.3696 | |
| 25 | G | L | -0.2019 | |
| 26 | S | L | -0.5107 | |
| 27 | S | L | -0.8415 | |
| 28 | S | L | -0.8604 | |
| 29 | N | L | 0.0000 | |
| 30 | I | L | 0.0000 | |
| 35 | G | L | -0.9619 | |
| 36 | S | L | -0.8532 | |
| 37 | S | L | -0.6216 | |
| 38 | S | L | -0.4789 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.6094 | |
| 45 | L | L | -0.4602 | |
| 46 | P | L | -0.4028 | |
| 47 | G | L | -0.4870 | |
| 48 | T | L | -0.6873 | |
| 49 | A | L | -0.7501 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.0657 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.8380 | |
| 56 | K | L | -1.1236 | |
| 57 | N | L | -1.4924 | |
| 65 | N | L | -2.1862 | |
| 66 | Q | L | -2.0230 | |
| 67 | R | L | -2.0783 | |
| 68 | P | L | -0.8886 | |
| 69 | S | L | -0.7600 | |
| 70 | G | L | -0.9536 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4088 | |
| 74 | D | L | -2.2975 | |
| 75 | R | L | -1.6027 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.3740 | |
| 78 | G | L | -1.2737 | |
| 79 | S | L | -1.1789 | |
| 80 | K | L | -1.2398 | |
| 83 | S | L | -0.8230 | |
| 84 | G | L | -0.8926 | |
| 85 | T | L | -0.7353 | |
| 86 | S | L | -0.7108 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.6250 | |
| 89 | L | L | 0.0000 | |
| 90 | A | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.8702 | |
| 93 | G | L | -1.8224 | |
| 94 | L | L | 0.0000 | |
| 95 | R | L | -2.1209 | |
| 96 | S | L | -1.5958 | |
| 97 | E | L | -2.3683 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.4639 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -0.9277 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | S | L | 0.0000 | |
| 106 | T | L | 0.0000 | |
| 107 | W | L | -0.1203 | |
| 108 | D | L | 0.0000 | |
| 109 | D | L | -1.6189 | |
| 110 | S | L | -0.5213 | |
| 113 | L | L | 0.6617 | |
| 114 | S | L | -0.0473 | |
| 115 | V | L | 0.2330 | |
| 116 | R | L | 0.0000 | |
| 117 | V | L | 0.0000 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.1162 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2187 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.1720 | |
| 126 | V | L | -0.0677 | |
| 127 | L | L | 1.3938 |