Chain sequence(s) |
A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:47) [INFO] Main: Simulation completed successfully. (00:02:49) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | G | A | -0.6890 | |
2 | P | A | -0.8064 | |
3 | G | A | -0.9351 | |
4 | P | A | -0.7973 | |
5 | G | A | -1.1012 | |
6 | A | A | -1.5734 | |
7 | E | A | -2.3950 | |
8 | K | A | -2.1875 | |
9 | L | A | -0.8248 | |
10 | R | A | -1.5789 | |
11 | H | A | -1.2528 | |
12 | L | A | -0.4240 | |
13 | N | A | -2.0036 | |
14 | E | A | -3.5732 | |
15 | K | A | -4.1378 | |
16 | R | A | -3.6830 | |
17 | R | A | -2.6302 | |
18 | F | A | -0.2167 | |
19 | H | A | -1.4502 | |
20 | N | A | -1.6319 | |
21 | G | A | -1.3831 | |
22 | P | A | -1.1911 | |
23 | G | A | -0.9199 | |
24 | P | A | -0.7085 | |
25 | G | A | -0.3782 | |
26 | L | A | -0.2514 | |
27 | D | A | -2.3596 | |
28 | K | A | -3.3052 | |
29 | K | A | -3.7958 | |
30 | Q | A | -2.8749 | |
31 | R | A | -2.1224 | |
32 | F | A | 0.1785 | |
33 | H | A | -0.5952 | |
34 | N | A | -0.7366 | |
35 | I | A | 0.3549 | |
36 | R | A | -1.7693 | |
37 | G | A | -1.5809 | |
38 | R | A | -1.9226 | |
39 | W | A | 0.0081 | |
40 | T | A | -0.2756 | |
41 | G | A | -0.6219 | |
42 | P | A | -0.7113 | |
43 | G | A | -0.9189 | |
44 | P | A | -1.0265 | |
45 | G | A | -1.3972 | |
46 | N | A | -1.6762 | |
47 | P | A | -1.3790 | |
48 | A | A | -1.6104 | |
49 | E | A | -2.3559 | |
50 | K | A | -2.1580 | |
51 | L | A | -0.7618 | |
52 | R | A | -1.5866 | |
53 | H | A | -1.1618 | |
54 | L | A | -0.3401 | |
55 | N | A | -1.9337 | |
56 | E | A | -3.5638 | |
57 | K | A | -4.0025 | |
58 | R | A | -3.5220 | |
59 | R | A | -2.5747 | |
60 | F | A | 0.0119 | |
61 | G | A | -0.4899 | |
62 | P | A | -0.5583 | |
63 | G | A | -0.6841 | |
64 | P | A | -1.0559 | |
65 | G | A | -0.9678 | |
66 | S | A | -0.9711 | |
67 | K | A | -1.2566 | |
68 | I | A | 0.2904 | |
69 | S | A | -1.0101 | |
70 | E | A | -1.7190 | |
71 | Y | A | 0.0933 | |
72 | R | A | -1.0128 | |
73 | H | A | -0.4679 | |
74 | Y | A | 1.2224 | |
75 | C | A | 1.9252 | |
76 | Y | A | 2.0328 | |
77 | S | A | 1.5080 | |
78 | L | A | 2.5846 | |
79 | Y | A | 2.0780 | |
80 | G | A | 0.3934 | |
81 | G | A | -0.2502 | |
82 | P | A | -0.8001 | |
83 | G | A | -0.8121 | |
84 | P | A | -0.1447 | |
85 | G | A | 0.2820 | |
86 | V | A | 1.8138 | |
87 | Y | A | 1.5576 | |
88 | D | A | 0.1234 | |
89 | F | A | 1.4927 | |
90 | A | A | 0.9028 | |
91 | F | A | 1.4585 | |
92 | R | A | -0.5162 | |
93 | D | A | 0.2188 | |
94 | L | A | 1.1211 | |
95 | A | A | -0.0456 | |
96 | A | A | 0.1202 | |
97 | Y | A | 0.2125 | |
98 | R | A | -0.9919 | |
99 | F | A | 0.3301 | |
100 | H | A | -0.3386 | |
101 | N | A | -0.9528 | |
102 | I | A | 0.9118 | |
103 | A | A | 0.5261 | |
104 | G | A | -0.4215 | |
105 | H | A | 0.0214 | |
106 | Y | A | 1.1491 | |
107 | A | A | 0.8567 | |
108 | A | A | 1.1344 | |
109 | Y | A | 1.9643 | |
110 | C | A | 0.0000 | |
111 | Y | A | 2.1842 | |
112 | S | A | 1.6055 | |
113 | L | A | 2.2252 | |
114 | Y | A | 2.2678 | |
115 | G | A | 1.0771 | |
116 | T | A | 1.1076 | |
117 | T | A | 1.1023 | |
118 | L | A | 1.5744 | |
119 | A | A | 1.0425 | |
120 | A | A | 0.0000 | |
121 | Y | A | 0.6549 | |
122 | K | A | -0.8508 | |
123 | T | A | -0.5643 | |
124 | V | A | 0.0384 | |
125 | L | A | -0.5706 | |
126 | E | A | -1.7169 | |
127 | L | A | 0.0127 | |
128 | T | A | -0.2177 | |
129 | E | A | -0.6398 | |
130 | V | A | 1.5685 | |
131 | A | A | 1.4379 | |
132 | A | A | 1.1178 | |
133 | Y | A | 2.0340 | |
134 | L | A | 2.0637 | |
135 | L | A | 1.8133 | |
136 | C | A | 1.1708 | |
137 | H | A | -0.4823 | |
138 | E | A | -1.7251 | |
139 | Q | A | -1.7055 | |
140 | L | A | -0.8205 | |
141 | S | A | -2.4348 | |
142 | D | A | -3.7676 | |
143 | S | A | -3.1156 | |
144 | E | A | -4.1515 | |
145 | E | A | -4.7705 | |
146 | E | A | -4.6652 | |
147 | N | A | -4.0982 | |
148 | D | A | -3.8088 | |
149 | G | A | -2.3439 | |
150 | P | A | -1.3457 | |
151 | G | A | -1.3850 | |
152 | P | A | -1.1206 | |
153 | G | A | -1.4007 | |
154 | Q | A | -1.8101 | |
155 | S | A | -1.0536 | |
156 | T | A | -0.7034 | |
157 | H | A | -0.4814 | |
158 | V | A | 1.0276 | |
159 | D | A | -0.1602 | |
160 | I | A | 0.5961 | |
161 | R | A | -1.5321 | |
162 | T | A | -0.4443 | |
163 | L | A | 0.6448 | |
164 | E | A | -1.1361 | |
165 | D | A | -1.1692 | |
166 | L | A | 1.1483 | |
167 | L | A | 1.7557 | |
168 | M | A | 1.0716 | |
169 | G | A | 0.1962 | |
170 | P | A | -0.4168 | |
171 | G | A | -0.9388 | |
172 | P | A | -0.7983 | |
173 | G | A | -0.8193 | |
174 | T | A | -0.6481 | |
175 | P | A | -0.4436 | |
176 | T | A | 0.0154 | |
177 | L | A | 1.2389 | |
178 | H | A | -0.1551 | |
179 | E | A | -0.7851 | |
180 | Y | A | 1.3416 | |
181 | M | A | 1.6114 | |
182 | L | A | 1.2485 | |
183 | D | A | -0.3563 | |
184 | L | A | 0.7600 | |
185 | Q | A | -1.0931 | |
186 | P | A | -1.6315 | |
187 | E | A | -2.2423 | |
188 | T | A | -1.5034 | |
189 | G | A | -1.2856 | |
190 | P | A | -1.0191 | |
191 | G | A | -0.7682 | |
192 | P | A | -0.6220 | |
193 | G | A | -0.4463 | |
194 | L | A | 0.4138 | |
195 | Q | A | -0.7651 | |
196 | D | A | -0.3743 | |
197 | I | A | 2.2251 | |
198 | V | A | 2.8258 | |
199 | L | A | 2.4538 | |
200 | H | A | 0.6868 | |
201 | L | A | 0.5580 | |
202 | E | A | -1.7202 | |
203 | P | A | -1.9658 | |
204 | Q | A | -2.3387 | |
205 | N | A | -2.5586 | |
206 | E | A | -1.8984 | |
207 | I | A | 0.3863 | |
208 | P | A | -0.2975 | |
209 | G | A | -0.5924 | |
210 | P | A | -0.9793 | |
211 | G | A | -1.3490 | |
212 | P | A | -1.2750 | |
213 | G | A | -1.7384 | |
214 | R | A | -2.3197 | |
215 | A | A | -1.2651 | |
216 | H | A | -0.9738 | |
217 | Y | A | 0.8662 | |
218 | N | A | 0.7561 | |
219 | I | A | 2.7960 | |
220 | V | A | 2.8724 | |
221 | T | A | 2.0785 | |
222 | F | A | 2.2767 | |
223 | A | A | 1.6855 | |
224 | A | A | 1.5691 | |
225 | Y | A | 1.7555 | |
226 | T | A | 1.1247 | |
227 | L | A | 1.5137 | |
228 | Q | A | 0.2730 | |
229 | D | A | -0.3548 | |
230 | I | A | 0.9962 | |
231 | V | A | 2.1608 | |
232 | L | A | 1.5958 | |
233 | H | A | 0.4975 | |
234 | L | A | 1.4559 | |
235 | A | A | 1.6860 | |
236 | A | A | 1.6364 | |
237 | Y | A | 1.9557 | |
238 | L | A | 2.1928 | |
239 | L | A | 2.5744 | |
240 | M | A | 2.7296 | |
241 | G | A | 2.0600 | |
242 | T | A | 2.3246 | |
243 | L | A | 3.1037 | |
244 | G | A | 2.2330 | |
245 | I | A | 3.0593 | |
246 | V | A | 2.9840 | |
247 | A | A | 1.9926 | |
248 | A | A | 1.7189 | |
249 | Y | A | 1.9604 | |
250 | L | A | 0.9843 | |
251 | P | A | -0.6108 | |
252 | A | A | -1.0810 | |
253 | R | A | -2.6897 | |
254 | R | A | -3.1241 | |
255 | A | A | -2.4630 | |
256 | E | A | -3.2642 | |
257 | P | A | -2.1640 | |
258 | Q | A | -1.7523 | |
259 | A | A | -0.5121 | |
260 | A | A | 0.3505 | |
261 | Y | A | 1.1886 |