Project name: 14_x11e6_i20e6_x4e7_i14e7

Status: done

Started: 2025-08-11 19:11:33
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Chain sequence(s) A: GPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPGVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:49)
Show buried residues

Minimal score value
-4.7705
Maximal score value
3.1037
Average score
-0.3112
Total score value
-81.2325

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6890
2 P A -0.8064
3 G A -0.9351
4 P A -0.7973
5 G A -1.1012
6 A A -1.5734
7 E A -2.3950
8 K A -2.1875
9 L A -0.8248
10 R A -1.5789
11 H A -1.2528
12 L A -0.4240
13 N A -2.0036
14 E A -3.5732
15 K A -4.1378
16 R A -3.6830
17 R A -2.6302
18 F A -0.2167
19 H A -1.4502
20 N A -1.6319
21 G A -1.3831
22 P A -1.1911
23 G A -0.9199
24 P A -0.7085
25 G A -0.3782
26 L A -0.2514
27 D A -2.3596
28 K A -3.3052
29 K A -3.7958
30 Q A -2.8749
31 R A -2.1224
32 F A 0.1785
33 H A -0.5952
34 N A -0.7366
35 I A 0.3549
36 R A -1.7693
37 G A -1.5809
38 R A -1.9226
39 W A 0.0081
40 T A -0.2756
41 G A -0.6219
42 P A -0.7113
43 G A -0.9189
44 P A -1.0265
45 G A -1.3972
46 N A -1.6762
47 P A -1.3790
48 A A -1.6104
49 E A -2.3559
50 K A -2.1580
51 L A -0.7618
52 R A -1.5866
53 H A -1.1618
54 L A -0.3401
55 N A -1.9337
56 E A -3.5638
57 K A -4.0025
58 R A -3.5220
59 R A -2.5747
60 F A 0.0119
61 G A -0.4899
62 P A -0.5583
63 G A -0.6841
64 P A -1.0559
65 G A -0.9678
66 S A -0.9711
67 K A -1.2566
68 I A 0.2904
69 S A -1.0101
70 E A -1.7190
71 Y A 0.0933
72 R A -1.0128
73 H A -0.4679
74 Y A 1.2224
75 C A 1.9252
76 Y A 2.0328
77 S A 1.5080
78 L A 2.5846
79 Y A 2.0780
80 G A 0.3934
81 G A -0.2502
82 P A -0.8001
83 G A -0.8121
84 P A -0.1447
85 G A 0.2820
86 V A 1.8138
87 Y A 1.5576
88 D A 0.1234
89 F A 1.4927
90 A A 0.9028
91 F A 1.4585
92 R A -0.5162
93 D A 0.2188
94 L A 1.1211
95 A A -0.0456
96 A A 0.1202
97 Y A 0.2125
98 R A -0.9919
99 F A 0.3301
100 H A -0.3386
101 N A -0.9528
102 I A 0.9118
103 A A 0.5261
104 G A -0.4215
105 H A 0.0214
106 Y A 1.1491
107 A A 0.8567
108 A A 1.1344
109 Y A 1.9643
110 C A 0.0000
111 Y A 2.1842
112 S A 1.6055
113 L A 2.2252
114 Y A 2.2678
115 G A 1.0771
116 T A 1.1076
117 T A 1.1023
118 L A 1.5744
119 A A 1.0425
120 A A 0.0000
121 Y A 0.6549
122 K A -0.8508
123 T A -0.5643
124 V A 0.0384
125 L A -0.5706
126 E A -1.7169
127 L A 0.0127
128 T A -0.2177
129 E A -0.6398
130 V A 1.5685
131 A A 1.4379
132 A A 1.1178
133 Y A 2.0340
134 L A 2.0637
135 L A 1.8133
136 C A 1.1708
137 H A -0.4823
138 E A -1.7251
139 Q A -1.7055
140 L A -0.8205
141 S A -2.4348
142 D A -3.7676
143 S A -3.1156
144 E A -4.1515
145 E A -4.7705
146 E A -4.6652
147 N A -4.0982
148 D A -3.8088
149 G A -2.3439
150 P A -1.3457
151 G A -1.3850
152 P A -1.1206
153 G A -1.4007
154 Q A -1.8101
155 S A -1.0536
156 T A -0.7034
157 H A -0.4814
158 V A 1.0276
159 D A -0.1602
160 I A 0.5961
161 R A -1.5321
162 T A -0.4443
163 L A 0.6448
164 E A -1.1361
165 D A -1.1692
166 L A 1.1483
167 L A 1.7557
168 M A 1.0716
169 G A 0.1962
170 P A -0.4168
171 G A -0.9388
172 P A -0.7983
173 G A -0.8193
174 T A -0.6481
175 P A -0.4436
176 T A 0.0154
177 L A 1.2389
178 H A -0.1551
179 E A -0.7851
180 Y A 1.3416
181 M A 1.6114
182 L A 1.2485
183 D A -0.3563
184 L A 0.7600
185 Q A -1.0931
186 P A -1.6315
187 E A -2.2423
188 T A -1.5034
189 G A -1.2856
190 P A -1.0191
191 G A -0.7682
192 P A -0.6220
193 G A -0.4463
194 L A 0.4138
195 Q A -0.7651
196 D A -0.3743
197 I A 2.2251
198 V A 2.8258
199 L A 2.4538
200 H A 0.6868
201 L A 0.5580
202 E A -1.7202
203 P A -1.9658
204 Q A -2.3387
205 N A -2.5586
206 E A -1.8984
207 I A 0.3863
208 P A -0.2975
209 G A -0.5924
210 P A -0.9793
211 G A -1.3490
212 P A -1.2750
213 G A -1.7384
214 R A -2.3197
215 A A -1.2651
216 H A -0.9738
217 Y A 0.8662
218 N A 0.7561
219 I A 2.7960
220 V A 2.8724
221 T A 2.0785
222 F A 2.2767
223 A A 1.6855
224 A A 1.5691
225 Y A 1.7555
226 T A 1.1247
227 L A 1.5137
228 Q A 0.2730
229 D A -0.3548
230 I A 0.9962
231 V A 2.1608
232 L A 1.5958
233 H A 0.4975
234 L A 1.4559
235 A A 1.6860
236 A A 1.6364
237 Y A 1.9557
238 L A 2.1928
239 L A 2.5744
240 M A 2.7296
241 G A 2.0600
242 T A 2.3246
243 L A 3.1037
244 G A 2.2330
245 I A 3.0593
246 V A 2.9840
247 A A 1.9926
248 A A 1.7189
249 Y A 1.9604
250 L A 0.9843
251 P A -0.6108
252 A A -1.0810
253 R A -2.6897
254 R A -3.1241
255 A A -2.4630
256 E A -3.2642
257 P A -2.1640
258 Q A -1.7523
259 A A -0.5121
260 A A 0.3505
261 Y A 1.1886
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Laboratory of Theory of Biopolymers 2018