Project name: query_structure

Status: done

Started: 2026-03-17 01:11:59
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRVLHSLLSKPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:36)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.4506
Maximal score value
1.6233
Average score
-0.6622
Total score value
-62.2444

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6233
2 S A 0.0512
3 D A -0.3035
4 V A -1.0527
5 P A 0.0000
6 R A -3.3280
7 D A -3.4506
8 L A -2.2040
9 E A -2.0707
10 V A 0.1084
11 V A 1.5412
12 A A 0.8825
13 A A 0.2931
14 T A -0.5396
15 P A -1.1430
16 T A -1.0045
17 S A -0.5381
18 L A 0.0000
19 L A 0.7158
20 I A 0.0000
21 S A -1.1174
22 W A 0.0000
23 D A -3.2882
24 A A -1.6987
25 P A 0.0000
26 A A 0.1303
27 V A 0.3519
28 T A -0.5053
29 V A -0.8339
30 R A -1.9322
31 Y A -0.9098
32 Y A 0.0000
33 R A -0.7864
34 I A 0.0000
35 T A -0.6931
36 Y A -0.4255
37 G A 0.0000
38 E A -1.5429
39 T A -1.2196
40 G A -1.2260
41 G A -1.3505
42 N A -1.5367
43 S A -0.8950
44 P A -0.4164
45 V A 0.2635
46 Q A -1.1973
47 E A -1.8584
48 F A -0.8161
49 T A -0.3396
50 V A 0.0000
51 P A -1.1320
52 G A -1.3389
53 S A -1.3612
54 K A -2.2123
55 S A -1.3977
56 T A -0.7726
57 A A 0.0000
58 T A 0.2288
59 I A 0.0000
60 S A -0.6607
61 G A -1.0311
62 L A 0.0000
63 K A -2.3643
64 P A -1.6630
65 G A -1.4333
66 V A -1.4089
67 D A -2.0521
68 Y A 0.0000
69 T A -0.7614
70 I A 0.0000
71 T A -0.2712
72 V A 0.0000
73 Y A -0.0526
74 A A 0.0000
75 V A 0.0000
76 T A -0.2148
77 G A -0.4589
78 R A -1.0287
79 V A 1.1065
80 L A 1.3574
81 H A -0.0466
82 S A 0.1407
83 L A 0.8550
84 L A 0.8902
85 S A 0.0000
86 K A -1.4303
87 P A -0.9773
88 I A 0.0000
89 S A -0.6341
90 I A -0.5757
91 N A -1.7106
92 Y A -1.4356
93 R A -2.5059
94 T A -1.6287
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Laboratory of Theory of Biopolymers 2018