| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRVLHSLLSKPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6233 | |
| 2 | S | A | 0.0512 | |
| 3 | D | A | -0.3035 | |
| 4 | V | A | -1.0527 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.3280 | |
| 7 | D | A | -3.4506 | |
| 8 | L | A | -2.2040 | |
| 9 | E | A | -2.0707 | |
| 10 | V | A | 0.1084 | |
| 11 | V | A | 1.5412 | |
| 12 | A | A | 0.8825 | |
| 13 | A | A | 0.2931 | |
| 14 | T | A | -0.5396 | |
| 15 | P | A | -1.1430 | |
| 16 | T | A | -1.0045 | |
| 17 | S | A | -0.5381 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7158 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1174 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.2882 | |
| 24 | A | A | -1.6987 | |
| 25 | P | A | 0.0000 | |
| 26 | A | A | 0.1303 | |
| 27 | V | A | 0.3519 | |
| 28 | T | A | -0.5053 | |
| 29 | V | A | -0.8339 | |
| 30 | R | A | -1.9322 | |
| 31 | Y | A | -0.9098 | |
| 32 | Y | A | 0.0000 | |
| 33 | R | A | -0.7864 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | -0.6931 | |
| 36 | Y | A | -0.4255 | |
| 37 | G | A | 0.0000 | |
| 38 | E | A | -1.5429 | |
| 39 | T | A | -1.2196 | |
| 40 | G | A | -1.2260 | |
| 41 | G | A | -1.3505 | |
| 42 | N | A | -1.5367 | |
| 43 | S | A | -0.8950 | |
| 44 | P | A | -0.4164 | |
| 45 | V | A | 0.2635 | |
| 46 | Q | A | -1.1973 | |
| 47 | E | A | -1.8584 | |
| 48 | F | A | -0.8161 | |
| 49 | T | A | -0.3396 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.1320 | |
| 52 | G | A | -1.3389 | |
| 53 | S | A | -1.3612 | |
| 54 | K | A | -2.2123 | |
| 55 | S | A | -1.3977 | |
| 56 | T | A | -0.7726 | |
| 57 | A | A | 0.0000 | |
| 58 | T | A | 0.2288 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -0.6607 | |
| 61 | G | A | -1.0311 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.3643 | |
| 64 | P | A | -1.6630 | |
| 65 | G | A | -1.4333 | |
| 66 | V | A | -1.4089 | |
| 67 | D | A | -2.0521 | |
| 68 | Y | A | 0.0000 | |
| 69 | T | A | -0.7614 | |
| 70 | I | A | 0.0000 | |
| 71 | T | A | -0.2712 | |
| 72 | V | A | 0.0000 | |
| 73 | Y | A | -0.0526 | |
| 74 | A | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | T | A | -0.2148 | |
| 77 | G | A | -0.4589 | |
| 78 | R | A | -1.0287 | |
| 79 | V | A | 1.1065 | |
| 80 | L | A | 1.3574 | |
| 81 | H | A | -0.0466 | |
| 82 | S | A | 0.1407 | |
| 83 | L | A | 0.8550 | |
| 84 | L | A | 0.8902 | |
| 85 | S | A | 0.0000 | |
| 86 | K | A | -1.4303 | |
| 87 | P | A | -0.9773 | |
| 88 | I | A | 0.0000 | |
| 89 | S | A | -0.6341 | |
| 90 | I | A | -0.5757 | |
| 91 | N | A | -1.7106 | |
| 92 | Y | A | -1.4356 | |
| 93 | R | A | -2.5059 | |
| 94 | T | A | -1.6287 |