| Chain sequence(s) |
A: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQWEVFSCSVMHEALHNHYTQKSLRRSPGK
B: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQWEVFSCSVMHEALHNHYTQKSLRRSPGK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:15)
[INFO] Main: Simulation completed successfully. (00:07:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6939 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | -0.1748 | |
| 4 | V | A | 0.0000 | |
| 5 | F | A | 0.9715 | |
| 6 | L | A | 0.7572 | |
| 7 | F | A | 0.9913 | |
| 8 | P | A | -0.1835 | |
| 9 | P | A | 0.0000 | |
| 10 | K | A | -2.0868 | |
| 11 | P | A | -1.4548 | |
| 12 | K | A | -1.3853 | |
| 13 | D | A | -1.4188 | |
| 14 | T | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | M | A | 0.1105 | |
| 17 | I | A | 1.1385 | |
| 18 | S | A | -0.1272 | |
| 19 | R | A | -1.5133 | |
| 20 | T | A | -0.9145 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -0.9755 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.2151 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | V | A | 0.0000 | |
| 29 | D | A | -1.6338 | |
| 30 | V | A | 0.0000 | |
| 31 | S | A | -2.1079 | |
| 32 | H | A | -2.6208 | |
| 33 | E | A | -2.9656 | |
| 34 | D | A | -2.5869 | |
| 35 | P | A | -2.7072 | |
| 36 | E | A | -3.1058 | |
| 37 | V | A | -1.9954 | |
| 38 | K | A | -2.2421 | |
| 39 | F | A | -1.1110 | |
| 40 | N | A | -1.0933 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.6102 | |
| 43 | V | A | -0.9036 | |
| 44 | D | A | -2.1471 | |
| 45 | G | A | -0.8791 | |
| 46 | V | A | 0.6031 | |
| 47 | E | A | -0.6371 | |
| 48 | V | A | -0.5351 | |
| 49 | H | A | -1.8808 | |
| 50 | N | A | -2.1777 | |
| 51 | A | A | -1.8863 | |
| 52 | K | A | -2.4382 | |
| 53 | T | A | -1.9334 | |
| 54 | K | A | -2.3803 | |
| 55 | P | A | -2.3990 | |
| 56 | R | A | -3.5200 | |
| 57 | E | A | -3.7323 | |
| 58 | E | A | -3.4020 | |
| 59 | Q | A | -1.6187 | |
| 60 | Y | A | 0.2395 | |
| 61 | N | A | -0.6443 | |
| 62 | S | A | -1.0107 | |
| 63 | T | A | -1.9659 | |
| 64 | Y | A | 0.0000 | |
| 65 | R | A | -2.5549 | |
| 66 | V | A | 0.0000 | |
| 67 | V | A | -0.9706 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.6052 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.5973 | |
| 74 | H | A | 0.0000 | |
| 75 | Q | A | -1.0467 | |
| 76 | D | A | -1.4511 | |
| 77 | W | A | 0.0000 | |
| 78 | L | A | -0.8988 | |
| 79 | N | A | -2.0559 | |
| 80 | G | A | -2.0627 | |
| 81 | K | A | -2.3073 | |
| 82 | E | A | -2.3419 | |
| 83 | Y | A | 0.0000 | |
| 84 | K | A | -1.5798 | |
| 85 | C | A | 0.0000 | |
| 86 | K | A | -1.2960 | |
| 87 | V | A | 0.0000 | |
| 88 | S | A | -1.3661 | |
| 89 | N | A | 0.0000 | |
| 90 | K | A | -2.5313 | |
| 91 | A | A | -1.4380 | |
| 92 | L | A | -0.5815 | |
| 93 | P | A | -0.4865 | |
| 94 | A | A | -0.3234 | |
| 95 | P | A | -0.6782 | |
| 96 | I | A | -0.2983 | |
| 97 | E | A | -1.4319 | |
| 98 | K | A | -1.1214 | |
| 99 | T | A | -1.0197 | |
| 100 | I | A | -0.3050 | |
| 101 | S | A | -1.1625 | |
| 102 | K | A | 0.0000 | |
| 103 | A | A | -1.0623 | |
| 104 | K | A | -2.2967 | |
| 105 | G | A | -1.9393 | |
| 106 | Q | A | -2.1146 | |
| 107 | P | A | -1.7380 | |
| 108 | R | A | -1.9815 | |
| 109 | E | A | -2.5434 | |
| 110 | P | A | 0.0000 | |
| 111 | Q | A | -1.0970 | |
| 112 | V | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | T | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | -0.2734 | |
| 117 | P | A | -0.5139 | |
| 118 | S | A | 0.0000 | |
| 119 | W | A | -0.4854 | |
| 120 | D | A | -1.2847 | |
| 121 | E | A | 0.0000 | |
| 122 | R | A | -2.5216 | |
| 123 | T | A | -1.9267 | |
| 124 | K | A | -2.8937 | |
| 125 | E | A | -3.5838 | |
| 126 | E | A | -3.5856 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | C | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | 0.0000 | |
| 135 | G | A | -0.8867 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | -1.0085 | |
| 138 | P | A | 0.0000 | |
| 139 | S | A | -0.1634 | |
| 140 | D | A | -1.0587 | |
| 141 | I | A | 0.0000 | |
| 142 | A | A | 0.0000 | |
| 143 | V | A | 0.0000 | |
| 144 | E | A | -1.3378 | |
| 145 | W | A | 0.0000 | |
| 146 | E | A | -2.0398 | |
| 147 | S | A | -1.5569 | |
| 148 | N | A | -2.0233 | |
| 149 | G | A | -1.8363 | |
| 150 | Q | A | -2.3897 | |
| 151 | P | A | -2.1106 | |
| 152 | E | A | -2.1451 | |
| 153 | N | A | -2.2134 | |
| 154 | N | A | -1.4995 | |
| 155 | Y | A | -1.0891 | |
| 156 | K | A | -0.8236 | |
| 157 | T | A | -0.2956 | |
| 158 | T | A | 0.0000 | |
| 159 | P | A | -0.1644 | |
| 160 | P | A | 0.1445 | |
| 161 | V | A | 0.5313 | |
| 162 | L | A | 0.7988 | |
| 163 | D | A | -0.4483 | |
| 164 | S | A | -1.1138 | |
| 165 | D | A | -1.8427 | |
| 166 | G | A | -0.7672 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.2250 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | S | A | 0.0000 | |
| 173 | K | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | -1.1931 | |
| 176 | V | A | 0.0000 | |
| 177 | E | A | -3.2537 | |
| 178 | A | A | -2.8768 | |
| 179 | S | A | -1.9000 | |
| 180 | E | A | -2.0404 | |
| 181 | W | A | 0.0000 | |
| 182 | W | A | -1.0802 | |
| 183 | Q | A | -1.3726 | |
| 184 | W | A | -0.6511 | |
| 185 | E | A | -1.1386 | |
| 186 | V | A | -0.5221 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | 0.0000 | |
| 189 | C | A | 0.0000 | |
| 190 | S | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | M | A | 0.0000 | |
| 193 | H | A | 0.0000 | |
| 194 | E | A | -1.0941 | |
| 195 | A | A | -1.4868 | |
| 196 | L | A | -1.3812 | |
| 197 | H | A | -1.7364 | |
| 198 | N | A | -1.4375 | |
| 199 | H | A | -0.9615 | |
| 200 | Y | A | -0.3667 | |
| 201 | T | A | -0.7173 | |
| 202 | Q | A | -1.2006 | |
| 203 | K | A | -1.0869 | |
| 204 | S | A | -0.7421 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -1.0795 | |
| 207 | R | A | -1.2427 | |
| 208 | S | A | -1.1817 | |
| 209 | P | A | -1.1711 | |
| 210 | G | A | -1.4750 | |
| 211 | K | A | -2.1922 | |
| 1 | G | B | -0.6647 | |
| 2 | P | B | 0.0000 | |
| 3 | S | B | -0.1009 | |
| 4 | V | B | 0.0000 | |
| 5 | F | B | 1.1684 | |
| 6 | L | B | 0.8508 | |
| 7 | F | B | 1.1244 | |
| 8 | P | B | -0.1350 | |
| 9 | P | B | 0.0000 | |
| 10 | K | B | -2.0706 | |
| 11 | P | B | -1.4872 | |
| 12 | K | B | -1.4252 | |
| 13 | D | B | -1.4219 | |
| 14 | T | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | 0.0504 | |
| 17 | I | B | 1.1118 | |
| 18 | S | B | -0.1331 | |
| 19 | R | B | -1.5091 | |
| 20 | T | B | -0.8682 | |
| 21 | P | B | 0.0000 | |
| 22 | E | B | -0.7939 | |
| 23 | V | B | 0.0000 | |
| 24 | T | B | 0.3220 | |
| 25 | C | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | V | B | 0.0000 | |
| 28 | V | B | -0.8886 | |
| 29 | D | B | -1.5826 | |
| 30 | V | B | 0.0000 | |
| 31 | S | B | -2.1023 | |
| 32 | H | B | -2.6132 | |
| 33 | E | B | -2.9555 | |
| 34 | D | B | -2.5630 | |
| 35 | P | B | -2.6967 | |
| 36 | E | B | -3.0807 | |
| 37 | V | B | -2.0000 | |
| 38 | K | B | -2.2426 | |
| 39 | F | B | -1.1623 | |
| 40 | N | B | -1.1723 | |
| 41 | W | B | 0.0000 | |
| 42 | Y | B | -0.7080 | |
| 43 | V | B | -1.0164 | |
| 44 | D | B | -2.3198 | |
| 45 | G | B | -0.9828 | |
| 46 | V | B | 0.5333 | |
| 47 | E | B | -0.6582 | |
| 48 | V | B | -0.5324 | |
| 49 | H | B | -1.8437 | |
| 50 | N | B | -2.1141 | |
| 51 | A | B | -1.7458 | |
| 52 | K | B | -2.2013 | |
| 53 | T | B | -1.8279 | |
| 54 | K | B | -2.3592 | |
| 55 | P | B | -2.3574 | |
| 56 | R | B | -3.4555 | |
| 57 | E | B | -3.7295 | |
| 58 | E | B | -3.4088 | |
| 59 | Q | B | -1.6453 | |
| 60 | Y | B | 0.2292 | |
| 61 | N | B | -0.6472 | |
| 62 | S | B | -1.0343 | |
| 63 | T | B | -1.9662 | |
| 64 | Y | B | 0.0000 | |
| 65 | R | B | -2.6555 | |
| 66 | V | B | 0.0000 | |
| 67 | V | B | -0.9740 | |
| 68 | S | B | 0.0000 | |
| 69 | V | B | 0.0000 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.4638 | |
| 72 | V | B | 0.0000 | |
| 73 | L | B | 0.6780 | |
| 74 | H | B | 0.0000 | |
| 75 | Q | B | -1.1184 | |
| 76 | D | B | -1.4091 | |
| 77 | W | B | 0.0000 | |
| 78 | L | B | -0.9036 | |
| 79 | N | B | -2.0635 | |
| 80 | G | B | -2.0849 | |
| 81 | K | B | -2.3375 | |
| 82 | E | B | -2.5671 | |
| 83 | Y | B | 0.0000 | |
| 84 | K | B | -1.7945 | |
| 85 | C | B | 0.0000 | |
| 86 | K | B | -1.5441 | |
| 87 | V | B | 0.0000 | |
| 88 | S | B | -1.4588 | |
| 89 | N | B | 0.0000 | |
| 90 | K | B | -2.5234 | |
| 91 | A | B | -1.4344 | |
| 92 | L | B | -0.5919 | |
| 93 | P | B | -0.4961 | |
| 94 | A | B | -0.4063 | |
| 95 | P | B | -0.8561 | |
| 96 | I | B | -0.6061 | |
| 97 | E | B | -1.9531 | |
| 98 | K | B | -1.2063 | |
| 99 | T | B | -1.1222 | |
| 100 | I | B | -0.3233 | |
| 101 | S | B | -1.2247 | |
| 102 | K | B | 0.0000 | |
| 103 | A | B | -1.0720 | |
| 104 | K | B | -2.2981 | |
| 105 | G | B | -1.9377 | |
| 106 | Q | B | -2.1132 | |
| 107 | P | B | -1.7561 | |
| 108 | R | B | -2.0334 | |
| 109 | E | B | -2.6164 | |
| 110 | P | B | 0.0000 | |
| 111 | Q | B | -1.1464 | |
| 112 | V | B | 0.0000 | |
| 113 | Y | B | 0.0000 | |
| 114 | T | B | 0.0000 | |
| 115 | L | B | 0.0000 | |
| 116 | P | B | -0.2243 | |
| 117 | P | B | -0.4181 | |
| 118 | S | B | 0.0000 | |
| 119 | W | B | -0.2414 | |
| 120 | D | B | -1.4262 | |
| 121 | E | B | 0.0000 | |
| 122 | R | B | -2.4102 | |
| 123 | T | B | -1.8311 | |
| 124 | K | B | -2.6988 | |
| 125 | E | B | -3.2849 | |
| 126 | E | B | -3.0190 | |
| 127 | V | B | 0.0000 | |
| 128 | S | B | 0.0000 | |
| 129 | L | B | 0.0000 | |
| 130 | T | B | 0.0000 | |
| 131 | C | B | 0.0000 | |
| 132 | L | B | 0.0000 | |
| 133 | V | B | 0.0000 | |
| 134 | K | B | -0.4690 | |
| 135 | G | B | -0.9560 | |
| 136 | F | B | 0.0000 | |
| 137 | Y | B | -1.0168 | |
| 138 | P | B | 0.0000 | |
| 139 | S | B | -0.1512 | |
| 140 | D | B | -1.1175 | |
| 141 | I | B | 0.0000 | |
| 142 | A | B | 0.0000 | |
| 143 | V | B | 0.0000 | |
| 144 | E | B | -1.2732 | |
| 145 | W | B | 0.0000 | |
| 146 | E | B | -1.9866 | |
| 147 | S | B | -1.4822 | |
| 148 | N | B | -1.9642 | |
| 149 | G | B | -1.8182 | |
| 150 | Q | B | -2.3606 | |
| 151 | P | B | -2.0686 | |
| 152 | E | B | -2.1007 | |
| 153 | N | B | -2.2035 | |
| 154 | N | B | -1.5503 | |
| 155 | Y | B | -1.0321 | |
| 156 | K | B | -0.8504 | |
| 157 | T | B | -0.3015 | |
| 158 | T | B | 0.0000 | |
| 159 | P | B | -0.1433 | |
| 160 | P | B | 0.1837 | |
| 161 | V | B | 0.6618 | |
| 162 | L | B | 1.0441 | |
| 163 | D | B | -0.3384 | |
| 164 | S | B | -1.0466 | |
| 165 | D | B | -1.7995 | |
| 166 | G | B | -0.6916 | |
| 167 | S | B | 0.0000 | |
| 168 | F | B | 0.2798 | |
| 169 | F | B | 0.0000 | |
| 170 | L | B | 0.0000 | |
| 171 | Y | B | 0.0000 | |
| 172 | S | B | 0.0000 | |
| 173 | K | B | 0.0000 | |
| 174 | L | B | 0.0000 | |
| 175 | T | B | -1.0612 | |
| 176 | V | B | 0.0000 | |
| 177 | E | B | -3.0278 | |
| 178 | A | B | -2.6678 | |
| 179 | S | B | -1.8011 | |
| 180 | E | B | -1.9370 | |
| 181 | W | B | 0.0000 | |
| 182 | W | B | -1.1009 | |
| 183 | Q | B | -1.3503 | |
| 184 | W | B | -0.6174 | |
| 185 | E | B | -0.9304 | |
| 186 | V | B | -0.4532 | |
| 187 | F | B | 0.0000 | |
| 188 | S | B | -1.3202 | |
| 189 | C | B | 0.0000 | |
| 190 | S | B | 0.0000 | |
| 191 | V | B | 0.0000 | |
| 192 | M | B | 0.0000 | |
| 193 | H | B | 0.0000 | |
| 194 | E | B | -1.1687 | |
| 195 | A | B | -1.5812 | |
| 196 | L | B | 0.0000 | |
| 197 | H | B | -1.8552 | |
| 198 | N | B | -1.5098 | |
| 199 | H | B | -1.0605 | |
| 200 | Y | B | -0.6940 | |
| 201 | T | B | -1.0220 | |
| 202 | Q | B | -1.6015 | |
| 203 | K | B | -1.2831 | |
| 204 | S | B | -0.8906 | |
| 205 | L | B | 0.0000 | |
| 206 | R | B | -1.0697 | |
| 207 | R | B | -1.2642 | |
| 208 | S | B | -1.2045 | |
| 209 | P | B | -1.1858 | |
| 210 | G | B | -1.4793 | |
| 211 | K | B | -2.1503 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine