| Chain sequence(s) |
D: KQKVVYEVLTDASGNQTLVVSASPENASALKAVEKKLGKPTFTYSGNRDAE
F: QGAIEQGITAIFPTPKDAEILALPPTPLDVNPSVNVNIGT input PDB |
| Selected Chain(s) | D,F |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | D | -1.9273 | |
| 2 | Q | D | -1.7082 | |
| 3 | K | D | -1.2896 | |
| 4 | V | D | 0.1005 | |
| 5 | V | D | 0.9014 | |
| 6 | Y | D | 1.2709 | |
| 7 | E | D | -0.1097 | |
| 8 | V | D | 0.7682 | |
| 9 | L | D | 1.0035 | |
| 10 | T | D | -0.2708 | |
| 11 | D | D | -1.3311 | |
| 12 | A | D | -0.2207 | |
| 13 | S | D | -0.2845 | |
| 14 | G | D | -0.7343 | |
| 15 | N | D | -1.5072 | |
| 16 | Q | D | -1.0558 | |
| 17 | T | D | -0.0837 | |
| 18 | L | D | 0.0000 | |
| 19 | V | D | 0.2543 | |
| 20 | V | D | 0.0000 | |
| 21 | S | D | -0.0006 | |
| 22 | A | D | 0.0000 | |
| 23 | S | D | -0.1402 | |
| 24 | P | D | -0.4661 | |
| 25 | E | D | -1.8912 | |
| 26 | N | D | -0.5795 | |
| 27 | A | D | -0.0583 | |
| 28 | S | D | -0.2060 | |
| 29 | A | D | -0.0225 | |
| 30 | L | D | 0.0000 | |
| 31 | K | D | -1.7555 | |
| 32 | A | D | -0.2211 | |
| 33 | V | D | 0.1074 | |
| 34 | E | D | -1.0317 | |
| 35 | K | D | -2.1086 | |
| 36 | K | D | -1.9776 | |
| 37 | L | D | -0.2220 | |
| 38 | G | D | -0.7259 | |
| 39 | K | D | -1.8225 | |
| 40 | P | D | -0.5587 | |
| 41 | T | D | -0.0533 | |
| 42 | F | D | 0.3352 | |
| 43 | T | D | 0.2274 | |
| 44 | Y | D | 1.2633 | |
| 45 | S | D | 0.0118 | |
| 46 | G | D | -0.5330 | |
| 47 | N | D | -1.5657 | |
| 48 | R | D | -2.2839 | |
| 49 | D | D | -2.0892 | |
| 50 | A | D | -0.2488 | |
| 51 | E | D | -2.0211 | |
| 1 | Q | F | -1.2804 | |
| 2 | G | F | -0.6665 | |
| 3 | A | F | 0.3167 | |
| 4 | I | F | 1.6807 | |
| 5 | E | F | -1.6508 | |
| 6 | Q | F | -1.5990 | |
| 7 | G | F | -0.6363 | |
| 8 | I | F | 0.2130 | |
| 9 | T | F | 0.0025 | |
| 10 | A | F | 0.0000 | |
| 11 | I | F | 0.9464 | |
| 12 | F | F | 0.3705 | |
| 13 | P | F | -0.2052 | |
| 15 | T | F | -0.1160 | |
| 16 | P | F | -0.5592 | |
| 17 | K | F | -1.7944 | |
| 18 | D | F | -0.5835 | |
| 19 | A | F | -0.3517 | |
| 20 | E | F | -1.5099 | |
| 21 | I | F | 1.5156 | |
| 22 | L | F | 0.8031 | |
| 23 | A | F | 0.4090 | |
| 24 | L | F | 1.5139 | |
| 25 | P | F | -0.0332 | |
| 26 | P | F | -0.3149 | |
| 27 | T | F | -0.1693 | |
| 28 | P | F | -0.1637 | |
| 29 | L | F | 0.1865 | |
| 30 | D | F | -1.6224 | |
| 31 | V | F | -0.1005 | |
| 32 | N | F | -1.2387 | |
| 33 | P | F | -0.5042 | |
| 34 | S | F | 0.0645 | |
| 35 | V | F | 1.5259 | |
| 36 | N | F | -0.6694 | |
| 37 | V | F | 1.3522 | |
| 38 | N | F | -0.6624 | |
| 39 | I | F | 1.7196 | |
| 40 | G | F | -0.1397 | |
| 41 | T | F | -0.1576 |