| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLKLSCAASGFTFNKYAMNWVRQAPGKGLEWVARIRSKYQNYATYYADSVKDRFTISRDDSKNTAYLQMNNLKTEDTAVYYCVRHGNFGNSYISYWAYWGQGTLVTVSS
L: QTVVTQEPSLTVSPGGTVTLTCGSSTGAVTSGYYPNWVQQKPGQAPRGLIGGTKFLAPGTPARFSGSLLGGKAALTLSGVQPEDEAEYYCALWYSNRWVFGGGTKLTVL input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:14)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9640 | |
| 2 | V | H | -0.9140 | |
| 3 | Q | H | -0.7693 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.0551 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1099 | |
| 8 | G | H | -0.6188 | |
| 9 | G | H | 0.1874 | |
| 11 | G | H | 0.8233 | |
| 12 | L | H | 1.4320 | |
| 13 | V | H | -0.0187 | |
| 14 | Q | H | -1.4705 | |
| 15 | P | H | -2.0044 | |
| 16 | G | H | -1.8692 | |
| 17 | G | H | -1.2955 | |
| 18 | S | H | -1.3883 | |
| 19 | L | H | -0.7888 | |
| 20 | K | H | -1.6446 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2040 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.1123 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.8477 | |
| 27 | G | H | -1.0672 | |
| 28 | F | H | -0.7532 | |
| 29 | T | H | -0.6252 | |
| 30 | F | H | 0.0000 | |
| 35 | N | H | -1.5385 | |
| 36 | K | H | -1.6403 | |
| 37 | Y | H | -0.8482 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.6528 | |
| 45 | A | H | -1.0597 | |
| 46 | P | H | -0.8282 | |
| 47 | G | H | -1.4585 | |
| 48 | K | H | -2.2700 | |
| 49 | G | H | -1.4779 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.8804 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | R | H | -0.1873 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.0957 | |
| 58 | S | H | 0.0000 | |
| 59 | K | H | -2.0836 | |
| 60 | Y | H | -0.3845 | |
| 61 | Q | H | -1.1568 | |
| 62 | N | H | -1.6652 | |
| 63 | Y | H | -0.9546 | |
| 64 | A | H | -0.5645 | |
| 65 | T | H | -0.1384 | |
| 66 | Y | H | -0.3505 | |
| 67 | Y | H | -1.0565 | |
| 68 | A | H | 0.0000 | |
| 69 | D | H | -2.4803 | |
| 70 | S | H | -1.7496 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5719 | |
| 74 | D | H | -2.8792 | |
| 75 | R | H | -2.2061 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8599 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2599 | |
| 80 | R | H | -1.0424 | |
| 81 | D | H | -1.5144 | |
| 82 | D | H | -2.0287 | |
| 83 | S | H | -1.6037 | |
| 84 | K | H | -2.3932 | |
| 85 | N | H | -1.8678 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2340 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9143 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.9283 | |
| 93 | N | H | -2.4366 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.5486 | |
| 96 | T | H | -1.8228 | |
| 97 | E | H | -2.2750 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.4173 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7334 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | V | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | G | H | 0.0000 | |
| 109 | N | H | -1.0870 | |
| 110 | F | H | -0.0638 | |
| 111 | G | H | -0.7467 | |
| 111A | N | H | -1.1850 | |
| 112B | S | H | 0.0037 | |
| 112A | Y | H | 1.0914 | |
| 112 | I | H | 0.7652 | |
| 113 | S | H | 0.4498 | |
| 114 | Y | H | 0.0000 | |
| 115 | W | H | 0.0000 | |
| 116 | A | H | -0.0179 | |
| 117 | Y | H | 0.3811 | |
| 118 | W | H | 0.0925 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -0.9830 | |
| 121 | G | H | -0.0645 | |
| 122 | T | H | 0.5780 | |
| 123 | L | H | 1.5380 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.3085 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7040 | |
| 128 | S | H | -0.5450 | |
| 1 | Q | L | -0.7962 | |
| 2 | T | L | 0.1765 | |
| 3 | V | L | 1.3912 | |
| 4 | V | L | 0.0000 | |
| 5 | T | L | 0.0207 | |
| 6 | Q | L | 0.0000 | |
| 7 | E | L | -0.7941 | |
| 8 | P | L | -0.8376 | |
| 9 | S | L | -0.6700 | |
| 11 | L | L | -0.0673 | |
| 12 | T | L | 0.3295 | |
| 13 | V | L | 0.3428 | |
| 14 | S | L | 0.1583 | |
| 15 | P | L | -0.6165 | |
| 16 | G | L | -0.9801 | |
| 17 | G | L | -0.6551 | |
| 18 | T | L | -0.4998 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.0731 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.0268 | |
| 23 | C | L | 0.0000 | |
| 24 | G | L | 0.0000 | |
| 25 | S | L | 0.1204 | |
| 26 | S | L | 0.0107 | |
| 27 | T | L | -0.2615 | |
| 28 | G | L | -0.6300 | |
| 29 | A | L | -0.2374 | |
| 30 | V | L | 0.0000 | |
| 31 | T | L | 0.0385 | |
| 35 | S | L | -0.2704 | |
| 36 | G | L | -0.1910 | |
| 37 | Y | L | 0.2419 | |
| 38 | Y | L | 0.4099 | |
| 39 | P | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | V | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -1.2210 | |
| 45 | K | L | -1.6544 | |
| 46 | P | L | -1.2063 | |
| 47 | G | L | -1.4106 | |
| 48 | Q | L | -1.9994 | |
| 49 | A | L | -1.2745 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -0.8449 | |
| 52 | G | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | G | L | 0.0000 | |
| 56 | G | L | 0.1206 | |
| 57 | T | L | 0.0000 | |
| 65 | K | L | -1.1063 | |
| 66 | F | L | 0.2379 | |
| 67 | L | L | 0.2852 | |
| 68 | A | L | 0.0000 | |
| 69 | P | L | -0.2619 | |
| 70 | G | L | -0.5963 | |
| 71 | T | L | -0.3481 | |
| 72 | P | L | -0.2245 | |
| 74 | A | L | -0.1606 | |
| 75 | R | L | -0.4920 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4668 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | 0.0684 | |
| 80 | L | L | 0.8451 | |
| 83 | L | L | 1.3760 | |
| 84 | G | L | 0.1668 | |
| 85 | G | L | -0.1028 | |
| 86 | K | L | -0.1308 | |
| 87 | A | L | 0.0000 | |
| 88 | A | L | 0.0000 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2267 | |
| 91 | L | L | 0.0000 | |
| 92 | S | L | -0.6415 | |
| 93 | G | L | -0.8321 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -1.4681 | |
| 96 | P | L | -1.1723 | |
| 97 | E | L | -1.8268 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -1.2803 | |
| 100 | A | L | 0.0000 | |
| 101 | E | L | -0.9390 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | L | L | 0.0000 | |
| 107 | W | L | 0.0079 | |
| 108 | Y | L | 0.0000 | |
| 109 | S | L | -0.8009 | |
| 114 | N | L | -1.2659 | |
| 115 | R | L | -0.9652 | |
| 116 | W | L | 0.0000 | |
| 117 | V | L | 0.3825 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8082 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.2098 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | 0.0744 | |
| 126 | V | L | 0.3538 | |
| 127 | L | L | 1.3779 |