| Chain sequence(s) |
A: AFIQLSKPCISDKECSIVKNYRARCRKGYCVRRRIR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 1.3980 | |
| 2 | F | A | 2.7838 | |
| 3 | I | A | 2.6898 | |
| 4 | Q | A | 0.8256 | |
| 5 | L | A | 1.0623 | |
| 6 | S | A | -0.3668 | |
| 7 | K | A | -1.3753 | |
| 8 | P | A | -0.6215 | |
| 9 | C | A | 0.4016 | |
| 10 | I | A | 0.5603 | |
| 11 | S | A | -1.5143 | |
| 12 | D | A | -3.3782 | |
| 13 | K | A | -2.3855 | |
| 14 | E | A | -1.4749 | |
| 15 | C | A | 0.0000 | |
| 16 | S | A | -0.8360 | |
| 17 | I | A | 1.3461 | |
| 18 | V | A | 1.1732 | |
| 19 | K | A | -0.7371 | |
| 20 | N | A | -0.3969 | |
| 21 | Y | A | 0.0937 | |
| 22 | R | A | -2.2558 | |
| 23 | A | A | 0.0000 | |
| 24 | R | A | -3.7048 | |
| 25 | C | A | 0.0000 | |
| 26 | R | A | -2.6780 | |
| 27 | K | A | -2.2442 | |
| 28 | G | A | -1.1054 | |
| 29 | Y | A | -0.1500 | |
| 30 | C | A | -0.7837 | |
| 31 | V | A | -1.6845 | |
| 32 | R | A | -3.5449 | |
| 33 | R | A | -3.9437 | |
| 34 | R | A | -3.0766 | |
| 35 | I | A | -0.2002 | |
| 36 | R | A | -1.7345 |