Project name: query_structure

Status: done

Started: 2026-03-16 22:53:19
Settings
Chain sequence(s) A: AFIQLSKPCISDKECSIVKNYRARCRKGYCVRRRIR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:38)
Show buried residues

Minimal score value
-3.9437
Maximal score value
2.7838
Average score
-0.7738
Total score value
-27.8584

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 1.3980
2 F A 2.7838
3 I A 2.6898
4 Q A 0.8256
5 L A 1.0623
6 S A -0.3668
7 K A -1.3753
8 P A -0.6215
9 C A 0.4016
10 I A 0.5603
11 S A -1.5143
12 D A -3.3782
13 K A -2.3855
14 E A -1.4749
15 C A 0.0000
16 S A -0.8360
17 I A 1.3461
18 V A 1.1732
19 K A -0.7371
20 N A -0.3969
21 Y A 0.0937
22 R A -2.2558
23 A A 0.0000
24 R A -3.7048
25 C A 0.0000
26 R A -2.6780
27 K A -2.2442
28 G A -1.1054
29 Y A -0.1500
30 C A -0.7837
31 V A -1.6845
32 R A -3.5449
33 R A -3.9437
34 R A -3.0766
35 I A -0.2002
36 R A -1.7345
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Laboratory of Theory of Biopolymers 2018