Project name: a beta 42 fibirl

Status: done

Started: 2026-06-01 15:06:17
Settings
Chain sequence(s) A: EVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.1019
Maximal score value
4.2865
Average score
0.8778
Total score value
28.0903

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
11 E A -1.1922
12 V A 0.3727
13 H A -1.2791
14 H A -1.7251
15 Q A -2.1019
16 K A -1.4405
17 L A 1.2826
18 V A 3.2235
19 F A 4.2865
20 F A 3.2146
21 A A 0.5872
22 E A -1.8645
23 D A -1.8072
24 V A -0.0240
25 G A -0.4268
26 S A -1.0444
27 N A -1.8064
28 K A -1.8769
29 G A -0.2695
30 A A 1.0203
31 I A 3.4243
32 I A 4.1049
33 G A 2.2148
34 L A 3.0548
35 M A 3.1794
36 V A 2.5194
37 G A 0.9708
38 G A 0.9736
39 V A 2.9950
40 V A 3.4564
41 I A 2.8702
42 A A 1.1978
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Laboratory of Theory of Biopolymers 2018