Chain sequence(s) |
H: QVQLVQSGAEVVKPGASVKISCKASGYTFTGYFMNWVKQSPGQSLEWIGRIHPYDGDTFYNQKFQGKATLTVDKSSNTAHMELLSLTSEDFAVYYCTRYDGSRAMDYWGQGTTVTVSS
L: DIVLTQSPLSLAVSLGQPAIISCKASQSVSFAGTSLMHWYHQKPGQQPRLLIYRASNLEAGVPDRFSGSGSKTDFTLTISPVEAEDAATYYCQQSREYPYTFGGGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35) [INFO] Main: Simulation completed successfully. (00:01:37) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3785 | |
2 | V | H | -0.5293 | |
3 | Q | H | -0.5883 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.6590 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5300 | |
8 | G | H | -0.3021 | |
9 | A | H | 0.1331 | |
11 | E | H | 0.2784 | |
12 | V | H | 1.4764 | |
13 | V | H | 0.1942 | |
14 | K | H | -1.6070 | |
15 | P | H | -1.5387 | |
16 | G | H | -1.0384 | |
17 | A | H | -0.7444 | |
18 | S | H | -0.8157 | |
19 | V | H | -0.7759 | |
20 | K | H | -1.9608 | |
21 | I | H | 0.0000 | |
22 | S | H | -0.6814 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.9013 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.7686 | |
27 | G | H | -0.9414 | |
28 | Y | H | -0.4037 | |
29 | T | H | -0.2222 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.1294 | |
36 | G | H | -0.0283 | |
37 | Y | H | 0.3909 | |
38 | F | H | 0.3336 | |
39 | M | H | 0.0000 | |
40 | N | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | -0.4431 | |
45 | S | H | -0.6791 | |
46 | P | H | -0.5876 | |
47 | G | H | -1.1372 | |
48 | Q | H | -1.6151 | |
49 | S | H | -1.0969 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.2324 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | R | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | H | H | -0.4381 | |
58 | P | H | 0.0000 | |
59 | Y | H | 0.0272 | |
62 | D | H | -1.6957 | |
63 | G | H | -1.5105 | |
64 | D | H | -1.8165 | |
65 | T | H | -0.6910 | |
66 | F | H | 0.1523 | |
67 | Y | H | -0.5559 | |
68 | N | H | -1.3911 | |
69 | Q | H | -2.4671 | |
70 | K | H | -2.8151 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.2737 | |
74 | G | H | -1.5304 | |
75 | K | H | -1.2680 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.7562 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.8474 | |
80 | V | H | -0.8479 | |
81 | D | H | -1.5459 | |
82 | K | H | -1.5982 | |
83 | S | H | -1.1152 | |
84 | S | H | -1.1027 | |
85 | N | H | -1.5038 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | H | H | -1.0560 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.3488 | |
91 | L | H | 0.0000 | |
92 | L | H | -0.3563 | |
93 | S | H | -0.5797 | |
94 | L | H | 0.0000 | |
95 | T | H | -0.9783 | |
96 | S | H | -1.0326 | |
97 | E | H | -1.5293 | |
98 | D | H | 0.0000 | |
99 | F | H | 0.9594 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.5544 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | T | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | Y | H | 0.0108 | |
108 | D | H | -0.4123 | |
109 | G | H | -0.6698 | |
110 | S | H | -0.6692 | |
113 | R | H | -0.9427 | |
114 | A | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | -0.1700 | |
117 | Y | H | 0.2985 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -0.7708 | |
121 | G | H | -0.4392 | |
122 | T | H | 0.0000 | |
123 | T | H | 0.4294 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.6244 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.4079 | |
128 | S | H | -0.6824 | |
1 | D | L | -1.5388 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7749 | |
4 | L | L | 0.0000 | |
5 | T | L | -0.3933 | |
6 | Q | L | 0.0000 | |
7 | S | L | 0.1228 | |
8 | P | L | 0.5599 | |
9 | L | L | 1.0328 | |
10 | S | L | -0.0417 | |
11 | L | L | 0.1987 | |
12 | A | L | -0.7196 | |
13 | V | L | -0.5174 | |
14 | S | L | -0.9122 | |
15 | L | L | -0.2228 | |
16 | G | L | -0.8962 | |
17 | Q | L | -1.3574 | |
18 | P | L | -0.5074 | |
19 | A | L | 0.0000 | |
20 | I | L | 1.4275 | |
21 | I | L | 0.0000 | |
22 | S | L | -0.3535 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.3959 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.9411 | |
27 | Q | L | -1.4945 | |
28 | S | L | -1.2771 | |
29 | V | L | 0.0000 | |
30 | S | L | -0.1760 | |
31 | F | L | 1.4264 | |
34 | A | L | 0.7544 | |
35 | G | L | -0.1921 | |
36 | T | L | -0.0897 | |
37 | S | L | 0.0000 | |
38 | L | L | 0.0000 | |
39 | M | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | H | L | 0.0000 | |
44 | Q | L | -1.1113 | |
45 | K | L | -1.4768 | |
46 | P | L | -1.0016 | |
47 | G | L | -1.2863 | |
48 | Q | L | -1.7914 | |
49 | Q | L | -1.3706 | |
50 | P | L | 0.0000 | |
51 | R | L | -1.0721 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.4750 | |
56 | R | L | -0.9358 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.7723 | |
66 | N | L | -0.6597 | |
67 | L | L | -0.3317 | |
68 | E | L | -0.5093 | |
69 | A | L | -0.2500 | |
70 | G | L | -0.6641 | |
71 | V | L | 0.0000 | |
72 | P | L | -1.0201 | |
74 | D | L | -1.8759 | |
75 | R | L | 0.0000 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.5274 | |
78 | G | L | -0.3311 | |
79 | S | L | -0.8999 | |
80 | G | L | -1.5761 | |
83 | S | L | -2.0070 | |
84 | K | L | -2.3978 | |
85 | T | L | 0.0000 | |
86 | D | L | -2.7033 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.4718 | |
89 | L | L | 0.0000 | |
90 | T | L | 0.3826 | |
91 | I | L | 0.0000 | |
92 | S | L | -0.7400 | |
93 | P | L | -1.0320 | |
94 | V | L | 0.0000 | |
95 | E | L | -1.3473 | |
96 | A | L | -1.2910 | |
97 | E | L | -2.0021 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.1698 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.6955 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | R | L | -0.5034 | |
109 | E | L | -0.8110 | |
114 | Y | L | 0.0915 | |
115 | P | L | -0.5790 | |
116 | Y | L | 0.0000 | |
117 | T | L | -0.2350 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.3271 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.0713 | |
124 | L | L | 0.0000 | |
125 | E | L | -1.4640 | |
126 | I | L | -0.9201 | |
127 | K | L | -1.5492 |