| Chain sequence(s) |
A: EVQVVESGGGLVQPGGSLRLSCAASGTGSFSTYAMGWYRQAPGNQHERVAIIDSVGNTNYPDSVKGRFTISRDNAKNTGYLQMNSLKSEDTAVYYCNLGTIWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:51)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9487 | |
| 2 | V | A | -0.8828 | |
| 3 | Q | A | -0.7311 | |
| 4 | V | A | 0.0000 | |
| 5 | V | A | 0.9242 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5350 | |
| 8 | G | A | -1.0517 | |
| 9 | G | A | -0.7924 | |
| 10 | G | A | -0.0547 | |
| 11 | L | A | 1.0121 | |
| 12 | V | A | -0.0281 | |
| 13 | Q | A | -1.3438 | |
| 14 | P | A | -1.6645 | |
| 15 | G | A | -1.4693 | |
| 16 | G | A | -1.0140 | |
| 17 | S | A | -1.4213 | |
| 18 | L | A | -1.0693 | |
| 19 | R | A | -2.3003 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.4910 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2039 | |
| 24 | A | A | -0.2850 | |
| 25 | S | A | -0.6340 | |
| 26 | G | A | -1.0582 | |
| 27 | T | A | -0.6192 | |
| 28 | G | A | 0.0000 | |
| 29 | S | A | -0.4844 | |
| 30 | F | A | 0.0000 | |
| 31 | S | A | -0.3228 | |
| 32 | T | A | 0.2694 | |
| 33 | Y | A | 0.8245 | |
| 34 | A | A | 0.1648 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | W | A | 0.0000 | |
| 38 | Y | A | -0.8538 | |
| 39 | R | A | -1.3248 | |
| 40 | Q | A | -1.7333 | |
| 41 | A | A | -1.5942 | |
| 42 | P | A | -1.0384 | |
| 43 | G | A | -1.5887 | |
| 44 | N | A | -2.5177 | |
| 45 | Q | A | -2.6954 | |
| 46 | H | A | -2.2812 | |
| 47 | E | A | -2.1934 | |
| 48 | R | A | -2.0292 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | -0.6606 | |
| 52 | I | A | 0.0000 | |
| 53 | D | A | -0.4972 | |
| 54 | S | A | 0.2144 | |
| 55 | V | A | 1.1507 | |
| 56 | G | A | -0.4738 | |
| 57 | N | A | -1.3537 | |
| 58 | T | A | -1.1491 | |
| 59 | N | A | -2.0261 | |
| 60 | Y | A | -1.6577 | |
| 61 | P | A | -1.9405 | |
| 62 | D | A | -2.6578 | |
| 63 | S | A | -1.8895 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -2.8184 | |
| 66 | G | A | -1.8551 | |
| 67 | R | A | -1.8504 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -1.1475 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.7952 | |
| 72 | R | A | -1.3891 | |
| 73 | D | A | -1.8325 | |
| 74 | N | A | -2.3055 | |
| 75 | A | A | -1.6865 | |
| 76 | K | A | -2.4177 | |
| 77 | N | A | -1.9100 | |
| 78 | T | A | -1.1317 | |
| 79 | G | A | 0.0000 | |
| 80 | Y | A | -0.6975 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6075 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.9222 | |
| 85 | S | A | -1.3929 | |
| 86 | L | A | 0.0000 | |
| 87 | K | A | -2.4066 | |
| 88 | S | A | -1.9582 | |
| 89 | E | A | -2.3492 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9007 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.3377 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.2536 | |
| 96 | C | A | 0.0000 | |
| 97 | N | A | 0.1871 | |
| 98 | L | A | 0.0000 | |
| 99 | G | A | 0.1255 | |
| 100 | T | A | 0.2344 | |
| 101 | I | A | 0.4594 | |
| 102 | W | A | 0.6571 | |
| 103 | G | A | 0.1011 | |
| 104 | Q | A | -0.7457 | |
| 105 | G | A | 0.0000 | |
| 106 | T | A | -0.6863 | |
| 107 | Q | A | -0.9588 | |
| 108 | V | A | 0.0000 | |
| 109 | T | A | -0.2722 | |
| 110 | V | A | 0.0000 | |
| 111 | S | A | -0.6640 | |
| 112 | S | A | -0.5041 |