| Chain sequence(s) |
A: GLPVLNPEPEPKSTDEYVTPTDLLYYAETDLITETGDPTADIVVNGEVVVPRVSAYQWRVFKLTLPDPNTLPLPSEDYLDRSTEIAIWRLLAYKIGVKGPLGVGTVGHPNFNRLGDVTNPTAPLHEGADDTVDYSYRPKRKQLYIIGNEPPLGVYTAPAPPAPGLPPGAEPPTTEVRTLIEHGDMADIGFGARDYAALEPRRDDVPDLIRNTTTKVPDFDGMKAEKYGNRMFDYDEYEKSSDVERYRRCGPELHPLPDALPPSPLYVKPPPWSPLAVRPSTRLFTVPDLGEITEEDLLFNRPVYLTKTAGLNNGILWNNQLYITILDNTRAEIETITTQLATPEPNVYNPAYYVTSRRYTREYQLELIVQLCKIPLTPEILKYIEKLDPRILYNANLPFIPPKSFPDPYAGKKFIEIDLKDKLSSNLSNSSLGQEYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | 0.4460 | |
| 2 | L | A | 1.8848 | |
| 3 | P | A | 1.3795 | |
| 4 | V | A | 1.9887 | |
| 5 | L | A | 1.6783 | |
| 6 | N | A | -0.6679 | |
| 7 | P | A | -1.3074 | |
| 8 | E | A | -2.5086 | |
| 9 | P | A | -2.4176 | |
| 10 | E | A | -2.7437 | |
| 11 | P | A | -1.8599 | |
| 12 | K | A | -2.1240 | |
| 13 | S | A | -1.6372 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.8940 | |
| 16 | E | A | -2.8235 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9253 | |
| 20 | P | A | -0.9170 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.6384 | |
| 23 | L | A | -0.5922 | |
| 24 | L | A | -0.2265 | |
| 25 | Y | A | -0.0744 | |
| 26 | Y | A | -0.2822 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9024 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2694 | |
| 31 | L | A | 0.2511 | |
| 32 | I | A | 0.1112 | |
| 33 | T | A | -0.2518 | |
| 34 | E | A | -0.4537 | |
| 35 | T | A | -0.3990 | |
| 36 | G | A | 0.0000 | |
| 37 | D | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -0.5787 | |
| 40 | A | A | -0.3536 | |
| 41 | D | A | 0.0592 | |
| 42 | I | A | 1.9750 | |
| 43 | V | A | 2.5322 | |
| 44 | V | A | 1.7946 | |
| 45 | N | A | -0.5273 | |
| 46 | G | A | -0.3531 | |
| 47 | E | A | -0.1924 | |
| 48 | V | A | 2.1050 | |
| 49 | V | A | 2.4918 | |
| 50 | V | A | 1.4960 | |
| 51 | P | A | 0.3027 | |
| 52 | R | A | -0.4144 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.5293 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.1454 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.0314 | |
| 70 | T | A | -0.5348 | |
| 71 | L | A | -0.0489 | |
| 72 | P | A | -0.3545 | |
| 73 | L | A | -0.5582 | |
| 74 | P | A | -0.7608 | |
| 75 | S | A | -1.5360 | |
| 76 | E | A | -3.1788 | |
| 77 | D | A | -2.8011 | |
| 78 | Y | A | -1.9380 | |
| 79 | L | A | 0.0000 | |
| 80 | D | A | -3.1565 | |
| 81 | R | A | -2.9837 | |
| 82 | S | A | -1.6537 | |
| 83 | T | A | -1.2850 | |
| 84 | E | A | -1.5081 | |
| 85 | I | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.2730 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | 0.1270 | |
| 92 | A | A | 0.0000 | |
| 93 | Y | A | 0.0000 | |
| 94 | K | A | -0.8676 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | K | A | -1.0866 | |
| 99 | G | A | -1.1434 | |
| 100 | P | A | -0.5564 | |
| 101 | L | A | -0.0895 | |
| 102 | G | A | -0.0338 | |
| 103 | V | A | -0.0087 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.5105 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -1.0466 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.7146 | |
| 110 | N | A | -2.4777 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -0.7943 | |
| 114 | L | A | -0.6589 | |
| 115 | G | A | -0.6735 | |
| 116 | D | A | -1.1570 | |
| 117 | V | A | -0.5597 | |
| 118 | T | A | -0.9847 | |
| 119 | N | A | -1.6698 | |
| 120 | P | A | -0.9818 | |
| 121 | T | A | -0.5556 | |
| 122 | A | A | -0.4306 | |
| 123 | P | A | -0.3260 | |
| 124 | L | A | -0.4161 | |
| 125 | H | A | -1.0823 | |
| 126 | E | A | -1.7351 | |
| 127 | G | A | -1.7229 | |
| 128 | A | A | -1.3122 | |
| 129 | D | A | -2.2972 | |
| 130 | D | A | -1.7470 | |
| 131 | T | A | -1.4921 | |
| 132 | V | A | -1.2448 | |
| 133 | D | A | -2.1452 | |
| 134 | Y | A | 0.0000 | |
| 135 | S | A | -0.8605 | |
| 136 | Y | A | 0.0000 | |
| 137 | R | A | -0.6749 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | K | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | N | A | 0.0000 | |
| 149 | E | A | -0.4688 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | L | A | -0.2773 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.6047 | |
| 155 | Y | A | -0.8397 | |
| 156 | T | A | -1.1235 | |
| 157 | A | A | -0.6610 | |
| 158 | P | A | -0.7669 | |
| 159 | A | A | -0.5383 | |
| 160 | P | A | -0.4788 | |
| 161 | P | A | -0.4478 | |
| 162 | A | A | -0.2644 | |
| 163 | P | A | -0.4091 | |
| 164 | G | A | -0.3968 | |
| 165 | L | A | -0.2448 | |
| 166 | P | A | -0.5826 | |
| 167 | P | A | -0.7590 | |
| 168 | G | A | -0.7714 | |
| 169 | A | A | -0.9385 | |
| 170 | E | A | -1.8566 | |
| 171 | P | A | -1.2405 | |
| 172 | P | A | -0.7397 | |
| 173 | T | A | -0.8865 | |
| 174 | T | A | -1.1436 | |
| 175 | E | A | -1.9987 | |
| 176 | V | A | -1.3863 | |
| 177 | R | A | -1.8186 | |
| 178 | T | A | -0.8045 | |
| 179 | L | A | -0.5395 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1167 | |
| 182 | H | A | -1.0155 | |
| 183 | G | A | -0.7442 | |
| 184 | D | A | -0.7052 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.2512 | |
| 190 | F | A | -0.0290 | |
| 191 | G | A | -0.2753 | |
| 192 | A | A | -0.4430 | |
| 193 | R | A | -0.8878 | |
| 194 | D | A | -0.8214 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.2711 | |
| 197 | A | A | -0.6002 | |
| 198 | L | A | -0.8945 | |
| 199 | E | A | -1.5448 | |
| 200 | P | A | -1.6455 | |
| 201 | R | A | -2.2734 | |
| 202 | R | A | -3.2250 | |
| 203 | D | A | -2.1466 | |
| 204 | D | A | -1.4938 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.4589 | |
| 208 | L | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -2.0106 | |
| 211 | N | A | -1.9546 | |
| 212 | T | A | -1.0267 | |
| 213 | T | A | -0.6768 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.2958 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | -1.0080 | |
| 220 | D | A | -2.3242 | |
| 221 | G | A | -1.7343 | |
| 222 | M | A | 0.0000 | |
| 223 | K | A | -2.6342 | |
| 224 | A | A | -1.8005 | |
| 225 | E | A | -1.8178 | |
| 226 | K | A | -1.7483 | |
| 227 | Y | A | -0.8080 | |
| 228 | G | A | 0.0000 | |
| 229 | N | A | -0.7010 | |
| 230 | R | A | -0.7154 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -0.4217 | |
| 234 | Y | A | -0.2400 | |
| 235 | D | A | -0.9291 | |
| 236 | E | A | -1.2184 | |
| 237 | Y | A | -1.1673 | |
| 238 | E | A | -2.0009 | |
| 239 | K | A | -1.9807 | |
| 240 | S | A | -1.4106 | |
| 241 | S | A | -0.9510 | |
| 242 | D | A | -1.4419 | |
| 243 | V | A | 0.0642 | |
| 244 | E | A | -1.0240 | |
| 245 | R | A | -1.1097 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.0361 | |
| 248 | R | A | 0.0000 | |
| 249 | C | A | 0.0000 | |
| 250 | G | A | -0.6503 | |
| 251 | P | A | -0.4350 | |
| 252 | E | A | -0.1368 | |
| 253 | L | A | 0.3980 | |
| 254 | H | A | -0.5730 | |
| 255 | P | A | -0.5704 | |
| 256 | L | A | 0.1886 | |
| 257 | P | A | -0.5133 | |
| 258 | D | A | -1.2740 | |
| 259 | A | A | 0.0669 | |
| 260 | L | A | 0.8574 | |
| 261 | P | A | 0.3773 | |
| 262 | P | A | 0.3640 | |
| 263 | S | A | 0.5340 | |
| 264 | P | A | 0.9100 | |
| 265 | L | A | 1.4666 | |
| 266 | Y | A | 1.2287 | |
| 267 | V | A | 1.1729 | |
| 268 | K | A | -0.5830 | |
| 269 | P | A | 0.0340 | |
| 270 | P | A | 0.1806 | |
| 271 | P | A | 0.3603 | |
| 272 | W | A | 1.2471 | |
| 273 | S | A | 0.6782 | |
| 274 | P | A | 0.5147 | |
| 275 | L | A | 0.8303 | |
| 276 | A | A | 0.8402 | |
| 277 | V | A | 1.3812 | |
| 278 | R | A | 0.1642 | |
| 279 | P | A | -0.3025 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.1450 | |
| 282 | R | A | 0.0067 | |
| 283 | L | A | 1.0226 | |
| 284 | F | A | 0.4021 | |
| 285 | T | A | -0.2670 | |
| 286 | V | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | 0.0000 | |
| 289 | L | A | 0.0000 | |
| 290 | G | A | -1.1811 | |
| 291 | E | A | -1.7649 | |
| 292 | I | A | -1.1247 | |
| 293 | T | A | -1.8503 | |
| 294 | E | A | -2.6538 | |
| 295 | E | A | -2.8218 | |
| 296 | D | A | -2.0514 | |
| 297 | L | A | -1.2328 | |
| 298 | L | A | -0.9739 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.5185 | |
| 301 | R | A | -1.8703 | |
| 302 | P | A | -0.9587 | |
| 303 | V | A | -0.0249 | |
| 304 | Y | A | -0.0447 | |
| 305 | L | A | -0.1753 | |
| 306 | T | A | -0.6845 | |
| 307 | K | A | -1.8100 | |
| 308 | T | A | 0.0000 | |
| 309 | A | A | -0.6418 | |
| 310 | G | A | -0.8206 | |
| 311 | L | A | -0.7875 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | N | A | -0.7733 | |
| 319 | N | A | -0.8539 | |
| 320 | Q | A | -0.6410 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | I | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | E | A | -1.8203 | |
| 333 | I | A | -1.4593 | |
| 334 | E | A | -2.1943 | |
| 335 | T | A | -0.9633 | |
| 336 | I | A | 0.6292 | |
| 337 | T | A | 0.5903 | |
| 338 | T | A | 0.6640 | |
| 339 | Q | A | 0.2671 | |
| 340 | L | A | 1.5715 | |
| 341 | A | A | 0.5466 | |
| 342 | T | A | -0.3048 | |
| 343 | P | A | -0.5620 | |
| 344 | E | A | -1.5740 | |
| 345 | P | A | -1.0620 | |
| 346 | N | A | -0.7548 | |
| 347 | V | A | 1.0046 | |
| 348 | Y | A | 1.2767 | |
| 349 | N | A | 0.2455 | |
| 350 | P | A | 0.5142 | |
| 351 | A | A | 0.5844 | |
| 352 | Y | A | 0.7255 | |
| 353 | Y | A | 1.3290 | |
| 354 | V | A | 1.6011 | |
| 355 | T | A | 0.6426 | |
| 356 | S | A | -0.3344 | |
| 357 | R | A | -1.4850 | |
| 358 | R | A | -1.4859 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.9444 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.5683 | |
| 363 | Y | A | 0.0000 | |
| 364 | Q | A | -0.5889 | |
| 365 | L | A | 0.0000 | |
| 366 | E | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | -0.3853 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.8811 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7647 | |
| 376 | L | A | -0.8094 | |
| 377 | T | A | -0.8228 | |
| 378 | P | A | -1.4098 | |
| 379 | E | A | -2.2723 | |
| 380 | I | A | -1.4816 | |
| 381 | L | A | -1.7250 | |
| 382 | K | A | -3.0330 | |
| 383 | Y | A | -2.2513 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -2.8485 | |
| 386 | K | A | -2.7597 | |
| 387 | L | A | -1.4315 | |
| 388 | D | A | -1.2468 | |
| 389 | P | A | -1.7258 | |
| 390 | R | A | -1.4405 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | Y | A | -1.2941 | |
| 394 | N | A | -1.9814 | |
| 395 | A | A | -1.3559 | |
| 396 | N | A | -1.6578 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.3938 | |
| 399 | F | A | 1.7313 | |
| 400 | I | A | 0.4294 | |
| 401 | P | A | -0.3895 | |
| 402 | P | A | -1.2456 | |
| 403 | K | A | -2.1021 | |
| 404 | S | A | -1.2063 | |
| 405 | F | A | -0.6368 | |
| 406 | P | A | -0.8606 | |
| 407 | D | A | -1.4544 | |
| 408 | P | A | -0.8972 | |
| 409 | Y | A | -1.0595 | |
| 410 | A | A | -1.1800 | |
| 411 | G | A | -1.4376 | |
| 412 | K | A | -2.0862 | |
| 413 | K | A | -2.5135 | |
| 414 | F | A | -1.4240 | |
| 415 | I | A | -1.0889 | |
| 416 | E | A | -2.2006 | |
| 417 | I | A | -1.8941 | |
| 418 | D | A | -3.0311 | |
| 419 | L | A | 0.0000 | |
| 420 | K | A | -3.2622 | |
| 421 | D | A | -3.1154 | |
| 422 | K | A | -2.3560 | |
| 423 | L | A | -1.0820 | |
| 424 | S | A | -0.8154 | |
| 425 | S | A | -0.5738 | |
| 426 | N | A | -1.3553 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.2408 | |
| 429 | N | A | -1.8444 | |
| 430 | S | A | 0.0000 | |
| 431 | S | A | -1.0728 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | Q | A | -1.8143 | |
| 435 | E | A | -1.5531 | |
| 436 | Y | A | -0.6279 | |
| 437 | L | A | -0.1607 | |
| 438 | N | A | -1.8620 | |
| 439 | R | A | -2.1647 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine