| Chain sequence(s) |
A: MSHHHHHHSGMEITEEVLEEERKRLTPELEKLVAEQGPEVQPRVDIFMQSWDRLINADWSEFSEEERWIVLKAEKRMILQSLRNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:42)
[INFO] Main: Simulation completed successfully. (00:02:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5441 | |
| 2 | S | A | -0.6426 | |
| 3 | H | A | -1.7651 | |
| 4 | H | A | -2.3845 | |
| 5 | H | A | -2.7355 | |
| 6 | H | A | -2.6389 | |
| 7 | H | A | -2.3734 | |
| 8 | H | A | -1.7626 | |
| 9 | S | A | -1.4866 | |
| 10 | G | A | -1.6466 | |
| 11 | M | A | -0.9069 | |
| 12 | E | A | -2.4588 | |
| 13 | I | A | 0.0000 | |
| 14 | T | A | -2.2561 | |
| 15 | E | A | -3.5483 | |
| 16 | E | A | -3.7147 | |
| 17 | V | A | -2.7104 | |
| 18 | L | A | 0.0000 | |
| 19 | E | A | -4.1156 | |
| 20 | E | A | -4.3493 | |
| 21 | E | A | 0.0000 | |
| 22 | R | A | -3.6840 | |
| 23 | K | A | -4.1029 | |
| 24 | R | A | -3.8331 | |
| 25 | L | A | 0.0000 | |
| 26 | T | A | -2.5512 | |
| 27 | P | A | -2.6783 | |
| 28 | E | A | -2.8916 | |
| 29 | L | A | 0.0000 | |
| 30 | E | A | -3.2839 | |
| 31 | K | A | -3.4844 | |
| 32 | L | A | 0.0000 | |
| 33 | V | A | -2.4034 | |
| 34 | A | A | -2.1169 | |
| 35 | E | A | -2.8253 | |
| 36 | Q | A | -2.1371 | |
| 37 | G | A | -1.7883 | |
| 38 | P | A | -1.5695 | |
| 39 | E | A | -2.4218 | |
| 40 | V | A | 0.0000 | |
| 41 | Q | A | -2.1364 | |
| 42 | P | A | -1.6833 | |
| 43 | R | A | -1.9220 | |
| 44 | V | A | 0.0000 | |
| 45 | D | A | -1.6000 | |
| 46 | I | A | 0.2560 | |
| 47 | F | A | -0.4167 | |
| 48 | M | A | -1.0498 | |
| 49 | Q | A | -1.4978 | |
| 50 | S | A | -1.0798 | |
| 51 | W | A | 0.0000 | |
| 52 | D | A | -2.5565 | |
| 53 | R | A | -3.1495 | |
| 54 | L | A | 0.0000 | |
| 55 | I | A | -2.7272 | |
| 56 | N | A | -2.8198 | |
| 57 | A | A | -2.2959 | |
| 58 | D | A | -2.4572 | |
| 59 | W | A | -1.5224 | |
| 60 | S | A | -1.3802 | |
| 61 | E | A | -1.9742 | |
| 62 | F | A | -0.9985 | |
| 63 | S | A | -1.4734 | |
| 64 | E | A | -2.1430 | |
| 65 | E | A | -2.3084 | |
| 66 | E | A | -1.4260 | |
| 67 | R | A | -1.0875 | |
| 68 | W | A | -0.4291 | |
| 69 | I | A | 0.9631 | |
| 70 | V | A | 0.3777 | |
| 71 | L | A | 0.0000 | |
| 72 | K | A | -0.7382 | |
| 73 | A | A | -0.4440 | |
| 74 | E | A | -0.7947 | |
| 75 | K | A | -1.6509 | |
| 76 | R | A | -2.3015 | |
| 77 | M | A | -1.2418 | |
| 78 | I | A | 0.0000 | |
| 79 | L | A | -1.7558 | |
| 80 | Q | A | -2.5473 | |
| 81 | S | A | -1.9636 | |
| 82 | L | A | 0.0000 | |
| 83 | R | A | -3.0753 | |
| 84 | N | A | -2.5836 | |
| 85 | S | A | -1.8273 |