Project name: query_structure

Status: done

Started: 2026-03-17 00:12:12
Settings
Chain sequence(s) A: MKYLLPTAAAGLLLLAAQPAMAQLQLVESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADYAGRGFCAGLYDYWSQGTPVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:22)
Show buried residues

Minimal score value
-3.7633
Maximal score value
3.4484
Average score
-0.3642
Total score value
-52.816

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.4976
2 K A -0.0081
3 Y A 1.8643
4 L A 2.4500
5 L A 2.3366
6 P A 1.0013
7 T A 0.4801
8 A A 0.1439
9 A A 0.1185
10 A A 0.4722
11 G A 0.9436
12 L A 2.7330
13 L A 3.3510
14 L A 3.4484
15 L A 2.8111
16 A A 1.0959
17 A A 0.0929
18 Q A -0.8926
19 P A -0.4651
20 A A -0.0920
21 M A 0.5588
22 A A -0.0438
23 Q A -0.7179
24 L A 0.2039
25 Q A -0.4229
26 L A 0.0000
27 V A 0.9646
28 E A -0.0012
29 S A -0.5312
30 G A -0.9759
31 G A -0.5143
32 G A 0.2542
33 L A 1.1427
34 V A -0.0543
35 Q A -1.3619
36 P A -1.6311
37 G A -1.4356
38 G A -0.9680
39 S A -1.2824
40 L A -0.9276
41 R A -2.1457
42 L A 0.0000
43 S A -0.4812
44 C A 0.0000
45 A A -0.1803
46 A A 0.0000
47 S A -0.2630
48 G A -0.4092
49 F A -0.0610
50 T A -0.3128
51 L A 0.0000
52 D A -0.5420
53 Y A 1.0728
54 Y A 0.9751
55 A A 0.0000
56 I A 0.0000
57 G A 0.0000
58 W A 0.0000
59 F A -0.6438
60 R A -1.2839
61 Q A -2.1558
62 A A -1.9959
63 P A -1.4689
64 G A -2.0273
65 K A -3.4553
66 E A -3.7633
67 R A -3.1410
68 E A -2.1255
69 G A -1.2699
70 V A 0.0000
71 S A 0.0000
72 C A 0.0000
73 I A 0.0000
74 S A 0.0000
75 S A 0.0824
76 S A -0.6531
77 G A -0.9343
78 G A -0.7505
79 S A -0.6056
80 T A -0.6544
81 N A -1.4285
82 Y A -1.4599
83 A A -1.6878
84 D A -2.6043
85 S A -1.8396
86 V A 0.0000
87 K A -2.7810
88 G A -1.7955
89 R A -1.5333
90 F A 0.0000
91 T A -1.0068
92 I A 0.0000
93 S A -0.5134
94 R A -1.0128
95 D A -1.7317
96 N A -1.7584
97 A A -1.4860
98 K A -2.1944
99 N A -1.6361
100 T A 0.0000
101 V A 0.0000
102 Y A -0.6664
103 L A 0.0000
104 Q A -1.2363
105 M A 0.0000
106 N A -1.5143
107 S A -1.3224
108 L A 0.0000
109 K A -2.5051
110 P A -1.9943
111 E A -2.3880
112 D A 0.0000
113 T A -0.7892
114 A A 0.0000
115 V A -0.1177
116 Y A 0.0000
117 Y A -0.1337
118 C A 0.0000
119 A A 0.0000
120 A A 0.0000
121 D A 0.0000
122 Y A 1.1826
123 A A 0.5604
124 G A -0.4081
125 R A -0.7838
126 G A 0.0277
127 F A 1.1256
128 C A 0.6060
129 A A 0.5381
130 G A 0.1927
131 L A 1.0875
132 Y A 0.0000
133 D A -0.9280
134 Y A 0.1397
135 W A 0.1603
136 S A -0.0635
137 Q A -0.8868
138 G A -0.3436
139 T A 0.0000
140 P A -0.0619
141 V A 0.0000
142 T A -0.0611
143 V A 0.0000
144 S A -0.7058
145 S A -0.5024
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Laboratory of Theory of Biopolymers 2018