| Chain sequence(s) |
A: MKYLLPTAAAGLLLLAAQPAMAQLQLVESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADYAGRGFCAGLYDYWSQGTPVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4976 | |
| 2 | K | A | -0.0081 | |
| 3 | Y | A | 1.8643 | |
| 4 | L | A | 2.4500 | |
| 5 | L | A | 2.3366 | |
| 6 | P | A | 1.0013 | |
| 7 | T | A | 0.4801 | |
| 8 | A | A | 0.1439 | |
| 9 | A | A | 0.1185 | |
| 10 | A | A | 0.4722 | |
| 11 | G | A | 0.9436 | |
| 12 | L | A | 2.7330 | |
| 13 | L | A | 3.3510 | |
| 14 | L | A | 3.4484 | |
| 15 | L | A | 2.8111 | |
| 16 | A | A | 1.0959 | |
| 17 | A | A | 0.0929 | |
| 18 | Q | A | -0.8926 | |
| 19 | P | A | -0.4651 | |
| 20 | A | A | -0.0920 | |
| 21 | M | A | 0.5588 | |
| 22 | A | A | -0.0438 | |
| 23 | Q | A | -0.7179 | |
| 24 | L | A | 0.2039 | |
| 25 | Q | A | -0.4229 | |
| 26 | L | A | 0.0000 | |
| 27 | V | A | 0.9646 | |
| 28 | E | A | -0.0012 | |
| 29 | S | A | -0.5312 | |
| 30 | G | A | -0.9759 | |
| 31 | G | A | -0.5143 | |
| 32 | G | A | 0.2542 | |
| 33 | L | A | 1.1427 | |
| 34 | V | A | -0.0543 | |
| 35 | Q | A | -1.3619 | |
| 36 | P | A | -1.6311 | |
| 37 | G | A | -1.4356 | |
| 38 | G | A | -0.9680 | |
| 39 | S | A | -1.2824 | |
| 40 | L | A | -0.9276 | |
| 41 | R | A | -2.1457 | |
| 42 | L | A | 0.0000 | |
| 43 | S | A | -0.4812 | |
| 44 | C | A | 0.0000 | |
| 45 | A | A | -0.1803 | |
| 46 | A | A | 0.0000 | |
| 47 | S | A | -0.2630 | |
| 48 | G | A | -0.4092 | |
| 49 | F | A | -0.0610 | |
| 50 | T | A | -0.3128 | |
| 51 | L | A | 0.0000 | |
| 52 | D | A | -0.5420 | |
| 53 | Y | A | 1.0728 | |
| 54 | Y | A | 0.9751 | |
| 55 | A | A | 0.0000 | |
| 56 | I | A | 0.0000 | |
| 57 | G | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | F | A | -0.6438 | |
| 60 | R | A | -1.2839 | |
| 61 | Q | A | -2.1558 | |
| 62 | A | A | -1.9959 | |
| 63 | P | A | -1.4689 | |
| 64 | G | A | -2.0273 | |
| 65 | K | A | -3.4553 | |
| 66 | E | A | -3.7633 | |
| 67 | R | A | -3.1410 | |
| 68 | E | A | -2.1255 | |
| 69 | G | A | -1.2699 | |
| 70 | V | A | 0.0000 | |
| 71 | S | A | 0.0000 | |
| 72 | C | A | 0.0000 | |
| 73 | I | A | 0.0000 | |
| 74 | S | A | 0.0000 | |
| 75 | S | A | 0.0824 | |
| 76 | S | A | -0.6531 | |
| 77 | G | A | -0.9343 | |
| 78 | G | A | -0.7505 | |
| 79 | S | A | -0.6056 | |
| 80 | T | A | -0.6544 | |
| 81 | N | A | -1.4285 | |
| 82 | Y | A | -1.4599 | |
| 83 | A | A | -1.6878 | |
| 84 | D | A | -2.6043 | |
| 85 | S | A | -1.8396 | |
| 86 | V | A | 0.0000 | |
| 87 | K | A | -2.7810 | |
| 88 | G | A | -1.7955 | |
| 89 | R | A | -1.5333 | |
| 90 | F | A | 0.0000 | |
| 91 | T | A | -1.0068 | |
| 92 | I | A | 0.0000 | |
| 93 | S | A | -0.5134 | |
| 94 | R | A | -1.0128 | |
| 95 | D | A | -1.7317 | |
| 96 | N | A | -1.7584 | |
| 97 | A | A | -1.4860 | |
| 98 | K | A | -2.1944 | |
| 99 | N | A | -1.6361 | |
| 100 | T | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | Y | A | -0.6664 | |
| 103 | L | A | 0.0000 | |
| 104 | Q | A | -1.2363 | |
| 105 | M | A | 0.0000 | |
| 106 | N | A | -1.5143 | |
| 107 | S | A | -1.3224 | |
| 108 | L | A | 0.0000 | |
| 109 | K | A | -2.5051 | |
| 110 | P | A | -1.9943 | |
| 111 | E | A | -2.3880 | |
| 112 | D | A | 0.0000 | |
| 113 | T | A | -0.7892 | |
| 114 | A | A | 0.0000 | |
| 115 | V | A | -0.1177 | |
| 116 | Y | A | 0.0000 | |
| 117 | Y | A | -0.1337 | |
| 118 | C | A | 0.0000 | |
| 119 | A | A | 0.0000 | |
| 120 | A | A | 0.0000 | |
| 121 | D | A | 0.0000 | |
| 122 | Y | A | 1.1826 | |
| 123 | A | A | 0.5604 | |
| 124 | G | A | -0.4081 | |
| 125 | R | A | -0.7838 | |
| 126 | G | A | 0.0277 | |
| 127 | F | A | 1.1256 | |
| 128 | C | A | 0.6060 | |
| 129 | A | A | 0.5381 | |
| 130 | G | A | 0.1927 | |
| 131 | L | A | 1.0875 | |
| 132 | Y | A | 0.0000 | |
| 133 | D | A | -0.9280 | |
| 134 | Y | A | 0.1397 | |
| 135 | W | A | 0.1603 | |
| 136 | S | A | -0.0635 | |
| 137 | Q | A | -0.8868 | |
| 138 | G | A | -0.3436 | |
| 139 | T | A | 0.0000 | |
| 140 | P | A | -0.0619 | |
| 141 | V | A | 0.0000 | |
| 142 | T | A | -0.0611 | |
| 143 | V | A | 0.0000 | |
| 144 | S | A | -0.7058 | |
| 145 | S | A | -0.5024 |