| Chain sequence(s) |
A: FFKGHFG
C: FFKGHFG B: FFKGHFG E: FFKGHFG D: FFKGHFG G: FFKGHFG F: FFKGHFG I: FFKGHFG H: FFKGHFG K: FFKGHFG J: FFKGHFG L: FFKGHFG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:09:12)
[INFO] Main: Simulation completed successfully. (00:09:15)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.7906 | |
| 2 | F | A | -0.4367 | |
| 3 | K | A | -1.7102 | |
| 4 | G | A | -1.2609 | |
| 5 | H | A | -0.7896 | |
| 6 | F | A | 0.7879 | |
| 7 | G | A | 0.1328 | |
| 1 | F | B | 0.0000 | |
| 2 | F | B | 0.0000 | |
| 3 | K | B | -0.8162 | |
| 4 | G | B | -1.1160 | |
| 5 | H | B | -1.2695 | |
| 6 | F | B | 0.2046 | |
| 7 | G | B | -0.0394 | |
| 1 | F | C | 1.8504 | |
| 2 | F | C | 0.3675 | |
| 3 | K | C | -1.5862 | |
| 4 | G | C | 0.0000 | |
| 5 | H | C | -1.2210 | |
| 6 | F | C | 0.2209 | |
| 7 | G | C | -0.1267 | |
| 1 | F | D | 1.7511 | |
| 2 | F | D | 0.0000 | |
| 3 | K | D | -1.9373 | |
| 4 | G | D | 0.0000 | |
| 5 | H | D | -1.0753 | |
| 6 | F | D | 0.9931 | |
| 7 | G | D | 0.2922 | |
| 1 | F | E | 0.9189 | |
| 2 | F | E | -0.6264 | |
| 3 | K | E | -1.7165 | |
| 4 | G | E | -1.2677 | |
| 5 | H | E | -0.8252 | |
| 6 | F | E | 0.8258 | |
| 7 | G | E | 0.1138 | |
| 1 | F | F | 0.6356 | |
| 2 | F | F | -0.5615 | |
| 3 | K | F | -1.5653 | |
| 4 | G | F | 0.0000 | |
| 5 | H | F | -0.5446 | |
| 6 | F | F | 0.8460 | |
| 7 | G | F | 0.1215 | |
| 1 | F | G | 0.0000 | |
| 2 | F | G | 0.0000 | |
| 3 | K | G | -1.9421 | |
| 4 | G | G | 0.0000 | |
| 5 | H | G | -0.7848 | |
| 6 | F | G | 0.6274 | |
| 7 | G | G | -0.0215 | |
| 1 | F | H | 0.3945 | |
| 2 | F | H | 0.0000 | |
| 3 | K | H | -2.3342 | |
| 4 | G | H | 0.0000 | |
| 5 | H | H | -1.6316 | |
| 6 | F | H | -0.3211 | |
| 7 | G | H | -0.5463 | |
| 1 | F | I | 0.9455 | |
| 2 | F | I | 0.0000 | |
| 3 | K | I | -2.5798 | |
| 4 | G | I | 0.0000 | |
| 5 | H | I | -2.0385 | |
| 6 | F | I | -0.6841 | |
| 7 | G | I | -0.7688 | |
| 1 | F | J | 2.9891 | |
| 2 | F | J | 0.0000 | |
| 3 | K | J | -1.8351 | |
| 4 | G | J | 0.0000 | |
| 5 | H | J | -2.2574 | |
| 6 | F | J | -0.8290 | |
| 7 | G | J | -1.0319 | |
| 1 | F | K | 3.1200 | |
| 2 | F | K | 0.0000 | |
| 3 | K | K | -1.0672 | |
| 4 | G | K | 0.0000 | |
| 5 | H | K | -1.6797 | |
| 6 | F | K | 0.0000 | |
| 7 | G | K | -0.8080 | |
| 1 | F | L | 1.9603 | |
| 2 | F | L | -0.8021 | |
| 3 | K | L | -1.6540 | |
| 4 | G | L | -1.2946 | |
| 5 | H | L | -1.0541 | |
| 6 | F | L | 0.7610 | |
| 7 | G | L | -0.1477 |