| Chain sequence(s) |
A: VLFSRGSGQSDDSDIWDDTALIKAYDKAVASFKTALKGEEEDEPEAATSKKNQPGKKRKNNKKNQSRKRANAPPDKEWQVGDSCSAYWSEDGQLYAATISFIDEKRGTCIVVFTGYGNEEEQNLEDLLSEISEGDEETNTKVKETESSTEESDRSTTPNQHKQQPHSKPQKSDDEALSSVLISWYMSGYHTGYYMGLKQGRKE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:40)
[INFO] Main: Simulation completed successfully. (00:02:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 3.0625 | |
| 2 | L | A | 3.1036 | |
| 3 | F | A | 2.5336 | |
| 4 | S | A | 0.3951 | |
| 5 | R | A | -1.5749 | |
| 6 | G | A | -1.5900 | |
| 7 | S | A | -1.4724 | |
| 8 | G | A | -1.9300 | |
| 9 | Q | A | -2.4853 | |
| 10 | S | A | -2.3590 | |
| 11 | D | A | -3.5187 | |
| 12 | D | A | -3.5721 | |
| 13 | S | A | -2.1035 | |
| 14 | D | A | -1.6512 | |
| 15 | I | A | 1.0112 | |
| 16 | W | A | 0.7458 | |
| 17 | D | A | -1.0611 | |
| 18 | D | A | -1.4114 | |
| 19 | T | A | -1.0001 | |
| 20 | A | A | -0.8777 | |
| 21 | L | A | 0.6181 | |
| 22 | I | A | 0.8718 | |
| 23 | K | A | -0.7886 | |
| 24 | A | A | -0.0929 | |
| 25 | Y | A | 0.7865 | |
| 26 | D | A | -1.0784 | |
| 27 | K | A | -1.5226 | |
| 28 | A | A | 0.1178 | |
| 29 | V | A | 0.8078 | |
| 30 | A | A | 0.0854 | |
| 31 | S | A | 0.2885 | |
| 32 | F | A | 1.5106 | |
| 33 | K | A | -0.1268 | |
| 34 | T | A | -0.3442 | |
| 35 | A | A | 0.2277 | |
| 36 | L | A | 0.4298 | |
| 37 | K | A | -1.9139 | |
| 38 | G | A | -2.4533 | |
| 39 | E | A | -3.5115 | |
| 40 | E | A | -4.1833 | |
| 41 | E | A | -4.4219 | |
| 42 | D | A | -4.1133 | |
| 43 | E | A | -3.7272 | |
| 44 | P | A | -2.9050 | |
| 45 | E | A | -3.2063 | |
| 46 | A | A | -2.1839 | |
| 47 | A | A | -1.6470 | |
| 48 | T | A | -2.0319 | |
| 49 | S | A | -2.7063 | |
| 50 | K | A | -3.3059 | |
| 51 | K | A | -3.6323 | |
| 52 | N | A | -3.3101 | |
| 53 | Q | A | -2.7321 | |
| 54 | P | A | -2.1198 | |
| 55 | G | A | -2.3310 | |
| 56 | K | A | -3.2593 | |
| 57 | K | A | -3.9654 | |
| 58 | R | A | -4.4069 | |
| 59 | K | A | -4.1492 | |
| 60 | N | A | -3.8021 | |
| 61 | N | A | -3.9706 | |
| 62 | K | A | -4.1201 | |
| 63 | K | A | -4.0285 | |
| 64 | N | A | -3.5717 | |
| 65 | Q | A | -3.4372 | |
| 66 | S | A | -3.1650 | |
| 67 | R | A | -3.8681 | |
| 68 | K | A | -3.9135 | |
| 69 | R | A | -3.5664 | |
| 70 | A | A | -2.2570 | |
| 71 | N | A | -2.3775 | |
| 72 | A | A | -1.4316 | |
| 73 | P | A | -1.6723 | |
| 74 | P | A | -2.4174 | |
| 75 | D | A | -3.1363 | |
| 76 | K | A | -3.5176 | |
| 77 | E | A | -3.4577 | |
| 78 | W | A | 0.0000 | |
| 79 | Q | A | -1.0700 | |
| 80 | V | A | 1.1750 | |
| 81 | G | A | -0.0180 | |
| 82 | D | A | -0.7157 | |
| 83 | S | A | -0.6898 | |
| 84 | C | A | 0.0000 | |
| 85 | S | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | Y | A | -0.3187 | |
| 88 | W | A | -1.4524 | |
| 89 | S | A | -1.8845 | |
| 90 | E | A | -2.9235 | |
| 91 | D | A | -3.1157 | |
| 92 | G | A | -2.0626 | |
| 93 | Q | A | -1.8020 | |
| 94 | L | A | 0.1404 | |
| 95 | Y | A | 0.6286 | |
| 96 | A | A | 0.5043 | |
| 97 | A | A | 0.0000 | |
| 98 | T | A | -0.0410 | |
| 99 | I | A | 0.0000 | |
| 100 | S | A | 0.6304 | |
| 101 | F | A | 1.6023 | |
| 102 | I | A | -0.2786 | |
| 103 | D | A | 0.0000 | |
| 104 | E | A | -3.2251 | |
| 105 | K | A | -3.4905 | |
| 106 | R | A | -3.4092 | |
| 107 | G | A | -2.7185 | |
| 108 | T | A | -2.2576 | |
| 109 | C | A | 0.0000 | |
| 110 | I | A | -0.0180 | |
| 111 | V | A | 0.0000 | |
| 112 | V | A | -0.5534 | |
| 113 | F | A | 0.0000 | |
| 114 | T | A | -0.2310 | |
| 115 | G | A | 0.0163 | |
| 116 | Y | A | 0.4686 | |
| 117 | G | A | -0.6348 | |
| 118 | N | A | -1.4452 | |
| 119 | E | A | -2.3473 | |
| 120 | E | A | -1.9483 | |
| 121 | E | A | -2.1176 | |
| 122 | Q | A | -1.9491 | |
| 123 | N | A | -2.4767 | |
| 124 | L | A | -2.4043 | |
| 125 | E | A | -2.8805 | |
| 126 | D | A | -2.3620 | |
| 127 | L | A | 0.0000 | |
| 128 | L | A | -0.6925 | |
| 129 | S | A | -0.8584 | |
| 130 | E | A | -1.2469 | |
| 131 | I | A | 0.5193 | |
| 132 | S | A | -0.9291 | |
| 133 | E | A | -2.8461 | |
| 134 | G | A | -2.8697 | |
| 135 | D | A | -4.3174 | |
| 136 | E | A | -4.4151 | |
| 137 | E | A | -3.7471 | |
| 138 | T | A | -2.7203 | |
| 139 | N | A | -3.0853 | |
| 140 | T | A | -1.8572 | |
| 141 | K | A | -1.8390 | |
| 142 | V | A | -0.3591 | |
| 143 | K | A | -2.2449 | |
| 144 | E | A | -2.9266 | |
| 145 | T | A | -2.0600 | |
| 146 | E | A | -2.4591 | |
| 147 | S | A | -1.7280 | |
| 148 | S | A | -1.6775 | |
| 149 | T | A | -1.7484 | |
| 150 | E | A | -2.8608 | |
| 151 | E | A | -3.2088 | |
| 152 | S | A | -2.7598 | |
| 153 | D | A | -3.1971 | |
| 154 | R | A | -2.8849 | |
| 155 | S | A | -1.5471 | |
| 156 | T | A | -0.7080 | |
| 157 | T | A | -0.9194 | |
| 158 | P | A | -1.4435 | |
| 159 | N | A | -2.4881 | |
| 160 | Q | A | -3.2507 | |
| 161 | H | A | -3.6549 | |
| 162 | K | A | -3.8978 | |
| 163 | Q | A | -3.0224 | |
| 164 | Q | A | -2.4774 | |
| 165 | P | A | -1.5381 | |
| 166 | H | A | -1.8693 | |
| 167 | S | A | -2.3146 | |
| 168 | K | A | -3.2713 | |
| 169 | P | A | -3.3821 | |
| 170 | Q | A | -3.5524 | |
| 171 | K | A | -3.5214 | |
| 172 | S | A | 0.0000 | |
| 173 | D | A | -3.4137 | |
| 174 | D | A | -3.0461 | |
| 175 | E | A | -2.8555 | |
| 176 | A | A | -0.8919 | |
| 177 | L | A | -0.4946 | |
| 178 | S | A | 0.0000 | |
| 179 | S | A | 0.0638 | |
| 180 | V | A | 1.2364 | |
| 181 | L | A | 0.8859 | |
| 182 | I | A | 1.2790 | |
| 183 | S | A | 1.3893 | |
| 184 | W | A | 1.7952 | |
| 185 | Y | A | 0.0000 | |
| 186 | M | A | 0.5899 | |
| 187 | S | A | 0.3094 | |
| 188 | G | A | 0.2383 | |
| 189 | Y | A | 0.2582 | |
| 190 | H | A | 0.2151 | |
| 191 | T | A | 0.3666 | |
| 192 | G | A | 0.2822 | |
| 193 | Y | A | 1.0034 | |
| 194 | Y | A | 1.1988 | |
| 195 | M | A | 0.5367 | |
| 196 | G | A | -0.6330 | |
| 197 | L | A | -0.6461 | |
| 198 | K | A | -2.3205 | |
| 199 | Q | A | -3.0940 | |
| 200 | G | A | -3.1510 | |
| 201 | R | A | -4.0472 | |
| 202 | K | A | -4.2781 | |
| 203 | E | A | -3.8301 |