Project name: query_structure

Status: done

Started: 2026-03-16 23:49:14
Settings
Chain sequence(s) A: INMLAPNMLPNALINMLAPNMLPNAL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:08)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:08)
Show buried residues

Minimal score value
-0.837
Maximal score value
2.0338
Average score
0.774
Total score value
20.1227

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I A 1.9397
2 N A 0.7488
3 M A 1.7921
4 L A 2.0050
5 A A 1.1165
6 P A 0.2693
7 N A -0.4850
8 M A 1.1725
9 L A 1.6310
10 P A 0.6595
11 N A -0.0398
12 A A 0.9494
13 L A 2.0338
14 I A 1.9057
15 N A 0.1500
16 M A 1.1854
17 L A 1.2899
18 A A 0.5573
19 P A -0.3065
20 N A -0.8370
21 M A 0.4711
22 L A 0.7906
23 P A -0.0509
24 N A -0.6776
25 A A 0.4075
26 L A 1.4444
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Laboratory of Theory of Biopolymers 2018