| Chain sequence(s) |
A: SEEERKKKQELSEKNIEKSKEQAEKNEPHYENLAKMMADASAAVAAAKAGDLATADAKLAAAKAYRDKNTVHKASGDAVLAATERQIAAARAARAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:22)
[INFO] Main: Simulation completed successfully. (00:02:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -3.0652 | |
| 2 | E | A | -4.7569 | |
| 3 | E | A | -5.3696 | |
| 4 | E | A | -5.6170 | |
| 5 | R | A | -6.0236 | |
| 6 | K | A | -6.0450 | |
| 7 | K | A | -5.8022 | |
| 8 | K | A | -5.2814 | |
| 9 | Q | A | -4.7573 | |
| 10 | E | A | -4.3569 | |
| 11 | L | A | -2.4818 | |
| 12 | S | A | -2.6943 | |
| 13 | E | A | -3.8354 | |
| 14 | K | A | -3.6888 | |
| 15 | N | A | -3.1633 | |
| 16 | I | A | -2.6330 | |
| 17 | E | A | -4.3504 | |
| 18 | K | A | -4.6160 | |
| 19 | S | A | -3.9895 | |
| 20 | K | A | -4.8210 | |
| 21 | E | A | -5.0599 | |
| 22 | Q | A | -4.6382 | |
| 23 | A | A | -4.0023 | |
| 24 | E | A | -4.5872 | |
| 25 | K | A | -4.3141 | |
| 26 | N | A | -3.0528 | |
| 27 | E | A | -3.2422 | |
| 28 | P | A | -2.1266 | |
| 29 | H | A | -1.6498 | |
| 30 | Y | A | -1.0794 | |
| 31 | E | A | -2.2590 | |
| 32 | N | A | -2.0557 | |
| 33 | L | A | -1.2356 | |
| 34 | A | A | -0.8892 | |
| 35 | K | A | -1.6112 | |
| 36 | M | A | 0.0000 | |
| 37 | M | A | -0.1638 | |
| 38 | A | A | -0.3345 | |
| 39 | D | A | 0.0000 | |
| 40 | A | A | 0.0000 | |
| 41 | S | A | -0.0760 | |
| 42 | A | A | -0.1737 | |
| 43 | A | A | 0.0000 | |
| 44 | V | A | -1.2098 | |
| 45 | A | A | -0.6472 | |
| 46 | A | A | -1.1051 | |
| 47 | A | A | 0.0000 | |
| 48 | K | A | -2.3508 | |
| 49 | A | A | -1.0987 | |
| 50 | G | A | -1.6882 | |
| 51 | D | A | -1.5705 | |
| 52 | L | A | -1.3931 | |
| 53 | A | A | -0.8648 | |
| 54 | T | A | -0.9407 | |
| 55 | A | A | 0.0000 | |
| 56 | D | A | -2.1394 | |
| 57 | A | A | -1.1660 | |
| 58 | K | A | -1.2476 | |
| 59 | L | A | -1.3220 | |
| 60 | A | A | -1.0630 | |
| 61 | A | A | -1.0249 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -2.1952 | |
| 64 | A | A | -1.8630 | |
| 65 | Y | A | -2.0655 | |
| 66 | R | A | -2.6746 | |
| 67 | D | A | -3.4407 | |
| 68 | K | A | -2.9555 | |
| 69 | N | A | 0.0000 | |
| 70 | T | A | -0.8516 | |
| 71 | V | A | 0.4583 | |
| 72 | H | A | -0.5664 | |
| 73 | K | A | -2.0032 | |
| 74 | A | A | -0.8063 | |
| 75 | S | A | -0.5130 | |
| 76 | G | A | 0.0000 | |
| 77 | D | A | -1.4550 | |
| 78 | A | A | -0.3020 | |
| 79 | V | A | -0.2514 | |
| 80 | L | A | -0.9550 | |
| 81 | A | A | -1.0980 | |
| 82 | A | A | -1.2025 | |
| 83 | T | A | 0.0000 | |
| 84 | E | A | -2.8124 | |
| 85 | R | A | -3.1124 | |
| 86 | Q | A | -2.5824 | |
| 87 | I | A | 0.0000 | |
| 88 | A | A | -1.8773 | |
| 89 | A | A | -1.9482 | |
| 90 | A | A | -2.3122 | |
| 91 | R | A | -2.8596 | |
| 92 | A | A | -1.3958 | |
| 93 | A | A | -1.5118 | |
| 94 | R | A | -2.5593 | |
| 95 | A | A | -1.2207 | |
| 96 | A | A | -0.7174 |