Project name: LC1_5

Status: done

Started: 2026-07-29 02:46:36
Settings
Chain sequence(s) A: SEEERKKKQELSEKNIEKSKEQAEKNEPHYENLAKMMADASAAVAAAKAGDLATADAKLAAAKAYRDKNTVHKASGDAVLAATERQIAAARAARAA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:23)
Show buried residues

Minimal score value
-6.045
Maximal score value
0.4583
Average score
-2.0873
Total score value
-200.3817

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -3.0652
2 E A -4.7569
3 E A -5.3696
4 E A -5.6170
5 R A -6.0236
6 K A -6.0450
7 K A -5.8022
8 K A -5.2814
9 Q A -4.7573
10 E A -4.3569
11 L A -2.4818
12 S A -2.6943
13 E A -3.8354
14 K A -3.6888
15 N A -3.1633
16 I A -2.6330
17 E A -4.3504
18 K A -4.6160
19 S A -3.9895
20 K A -4.8210
21 E A -5.0599
22 Q A -4.6382
23 A A -4.0023
24 E A -4.5872
25 K A -4.3141
26 N A -3.0528
27 E A -3.2422
28 P A -2.1266
29 H A -1.6498
30 Y A -1.0794
31 E A -2.2590
32 N A -2.0557
33 L A -1.2356
34 A A -0.8892
35 K A -1.6112
36 M A 0.0000
37 M A -0.1638
38 A A -0.3345
39 D A 0.0000
40 A A 0.0000
41 S A -0.0760
42 A A -0.1737
43 A A 0.0000
44 V A -1.2098
45 A A -0.6472
46 A A -1.1051
47 A A 0.0000
48 K A -2.3508
49 A A -1.0987
50 G A -1.6882
51 D A -1.5705
52 L A -1.3931
53 A A -0.8648
54 T A -0.9407
55 A A 0.0000
56 D A -2.1394
57 A A -1.1660
58 K A -1.2476
59 L A -1.3220
60 A A -1.0630
61 A A -1.0249
62 A A 0.0000
63 K A -2.1952
64 A A -1.8630
65 Y A -2.0655
66 R A -2.6746
67 D A -3.4407
68 K A -2.9555
69 N A 0.0000
70 T A -0.8516
71 V A 0.4583
72 H A -0.5664
73 K A -2.0032
74 A A -0.8063
75 S A -0.5130
76 G A 0.0000
77 D A -1.4550
78 A A -0.3020
79 V A -0.2514
80 L A -0.9550
81 A A -1.0980
82 A A -1.2025
83 T A 0.0000
84 E A -2.8124
85 R A -3.1124
86 Q A -2.5824
87 I A 0.0000
88 A A -1.8773
89 A A -1.9482
90 A A -2.3122
91 R A -2.8596
92 A A -1.3958
93 A A -1.5118
94 R A -2.5593
95 A A -1.2207
96 A A -0.7174
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Laboratory of Theory of Biopolymers 2018