Project name: query_structure

Status: done

Started: 2026-03-16 23:24:58
Settings
Chain sequence(s) A: GIRCPKSWKCKAFKQRVLKRLLAMLRQHAF
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-2.0914
Maximal score value
1.5584
Average score
-0.4785
Total score value
-14.3539

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.1158
2 I A 0.7393
3 R A -1.1434
4 C A -0.9745
5 P A -1.0484
6 K A -1.7016
7 S A -0.7850
8 W A -0.1288
9 K A -1.7972
10 C A -1.3209
11 K A -2.0914
12 A A -0.9534
13 F A 0.2055
14 K A -1.8099
15 Q A -1.9205
16 R A -1.9431
17 V A -0.3596
18 L A 0.3503
19 K A -0.8865
20 R A -0.3428
21 L A 1.5555
22 L A 1.0898
23 A A 0.2784
24 M A 0.7736
25 L A 0.8003
26 R A -1.2536
27 Q A -1.1825
28 H A -0.5336
29 A A 0.3559
30 F A 1.5584
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Laboratory of Theory of Biopolymers 2018