| Chain sequence(s) |
A: TTVHQKTNKLKSCPDGYTSGVECRFRGYTCANDGCWRVCSFTTCSGWMPASDTYRYEYHVDAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 0.2659 | |
| 2 | T | A | 0.3048 | |
| 3 | V | A | 0.6254 | |
| 4 | H | A | -1.2555 | |
| 5 | Q | A | -2.1941 | |
| 6 | K | A | -3.0089 | |
| 7 | T | A | -2.2753 | |
| 8 | N | A | -2.4481 | |
| 9 | K | A | -2.2649 | |
| 10 | L | A | -0.3938 | |
| 11 | K | A | -1.5514 | |
| 12 | S | A | -0.8176 | |
| 13 | C | A | -0.8580 | |
| 14 | P | A | -1.3514 | |
| 15 | D | A | -2.2191 | |
| 16 | G | A | -1.4796 | |
| 17 | Y | A | -0.7830 | |
| 18 | T | A | -0.3809 | |
| 19 | S | A | -0.8752 | |
| 20 | G | A | 0.0000 | |
| 21 | V | A | -1.0395 | |
| 22 | E | A | -1.0460 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -0.9985 | |
| 25 | F | A | 0.0683 | |
| 26 | R | A | -1.3948 | |
| 27 | G | A | -0.7004 | |
| 28 | Y | A | 0.1562 | |
| 29 | T | A | 0.1781 | |
| 30 | C | A | 0.0000 | |
| 31 | A | A | -0.8974 | |
| 32 | N | A | -1.7988 | |
| 33 | D | A | -2.1135 | |
| 34 | G | A | 0.0000 | |
| 35 | C | A | 0.0000 | |
| 36 | W | A | -0.1128 | |
| 37 | R | A | -0.9663 | |
| 38 | V | A | 1.1493 | |
| 39 | C | A | 0.5636 | |
| 40 | S | A | 0.8993 | |
| 41 | F | A | 1.7549 | |
| 42 | T | A | 0.8682 | |
| 43 | T | A | 0.6442 | |
| 44 | C | A | 0.8069 | |
| 45 | S | A | 0.2386 | |
| 46 | G | A | 0.1796 | |
| 47 | W | A | 0.8908 | |
| 48 | M | A | 0.3194 | |
| 49 | P | A | -0.3711 | |
| 50 | A | A | -0.6256 | |
| 51 | S | A | -0.5910 | |
| 52 | D | A | -1.3162 | |
| 53 | T | A | -0.7513 | |
| 54 | Y | A | -0.7256 | |
| 55 | R | A | -1.4033 | |
| 56 | Y | A | -0.0258 | |
| 57 | E | A | -1.1100 | |
| 58 | Y | A | 0.3595 | |
| 59 | H | A | -0.4381 | |
| 60 | V | A | 0.7205 | |
| 61 | D | A | -0.6921 | |
| 62 | A | A | 0.1860 | |
| 63 | W | A | 0.9502 |