Project name: query_structure

Status: done

Started: 2026-03-16 19:54:56
Settings
Chain sequence(s) A: AAKYCKLPVRYGPCKKKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-3.277
Maximal score value
0.0
Average score
-1.1762
Total score value
-67.0417

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.5258
2 A A -0.7930
3 K A -1.8837
4 Y A -0.9820
5 C A 0.0000
6 K A -1.9227
7 L A -0.9164
8 P A -0.5180
9 V A -0.4432
10 R A -1.2149
11 Y A -0.4783
12 G A -0.7314
13 P A -0.7364
14 C A -1.1283
15 K A -2.6355
16 K A -3.0175
17 K A -2.6347
18 I A -1.0507
19 P A -1.1214
20 S A 0.0000
21 F A -0.7632
22 Y A -0.8257
23 Y A 0.0000
24 K A -1.8733
25 W A -1.6597
26 K A -2.5370
27 A A -2.0128
28 K A -2.6479
29 Q A -2.2477
30 C A -1.1730
31 L A -0.1349
32 P A -0.4239
33 F A 0.0000
34 D A -1.5163
35 Y A 0.0000
36 S A 0.0000
37 G A -0.9050
38 C A -0.0618
39 G A -0.4579
40 G A -0.8966
41 N A -0.6859
42 A A -0.8089
43 N A 0.0000
44 R A -1.1222
45 F A -1.3799
46 K A -1.9061
47 T A -1.7721
48 I A -1.4473
49 E A -2.9615
50 E A -2.6631
51 C A 0.0000
52 R A -3.2770
53 R A -3.1044
54 T A -1.5567
55 C A 0.0000
56 V A -0.8270
57 G A -0.6590
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Laboratory of Theory of Biopolymers 2018