| Chain sequence(s) |
A: AAKYCKLPVRYGPCKKKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.5258 | |
| 2 | A | A | -0.7930 | |
| 3 | K | A | -1.8837 | |
| 4 | Y | A | -0.9820 | |
| 5 | C | A | 0.0000 | |
| 6 | K | A | -1.9227 | |
| 7 | L | A | -0.9164 | |
| 8 | P | A | -0.5180 | |
| 9 | V | A | -0.4432 | |
| 10 | R | A | -1.2149 | |
| 11 | Y | A | -0.4783 | |
| 12 | G | A | -0.7314 | |
| 13 | P | A | -0.7364 | |
| 14 | C | A | -1.1283 | |
| 15 | K | A | -2.6355 | |
| 16 | K | A | -3.0175 | |
| 17 | K | A | -2.6347 | |
| 18 | I | A | -1.0507 | |
| 19 | P | A | -1.1214 | |
| 20 | S | A | 0.0000 | |
| 21 | F | A | -0.7632 | |
| 22 | Y | A | -0.8257 | |
| 23 | Y | A | 0.0000 | |
| 24 | K | A | -1.8733 | |
| 25 | W | A | -1.6597 | |
| 26 | K | A | -2.5370 | |
| 27 | A | A | -2.0128 | |
| 28 | K | A | -2.6479 | |
| 29 | Q | A | -2.2477 | |
| 30 | C | A | -1.1730 | |
| 31 | L | A | -0.1349 | |
| 32 | P | A | -0.4239 | |
| 33 | F | A | 0.0000 | |
| 34 | D | A | -1.5163 | |
| 35 | Y | A | 0.0000 | |
| 36 | S | A | 0.0000 | |
| 37 | G | A | -0.9050 | |
| 38 | C | A | -0.0618 | |
| 39 | G | A | -0.4579 | |
| 40 | G | A | -0.8966 | |
| 41 | N | A | -0.6859 | |
| 42 | A | A | -0.8089 | |
| 43 | N | A | 0.0000 | |
| 44 | R | A | -1.1222 | |
| 45 | F | A | -1.3799 | |
| 46 | K | A | -1.9061 | |
| 47 | T | A | -1.7721 | |
| 48 | I | A | -1.4473 | |
| 49 | E | A | -2.9615 | |
| 50 | E | A | -2.6631 | |
| 51 | C | A | 0.0000 | |
| 52 | R | A | -3.2770 | |
| 53 | R | A | -3.1044 | |
| 54 | T | A | -1.5567 | |
| 55 | C | A | 0.0000 | |
| 56 | V | A | -0.8270 | |
| 57 | G | A | -0.6590 |