Chain sequence(s) |
A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVQSGAEVKKPGASVKVSCKASGFTLTNYGMNWVRQARGQRLEWIGWINTDTGEPTYADDFKGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARNPPYYYGTNYAEAMDYWGQGTTVTVSS L: DIQMTQSPSSLSASVGDRVTITCSSSQDISNYLNWYLQKPGQSPQLLIYYTSTLHLGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYYNLPWTFGQGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:09) [INFO] Main: Simulation completed successfully. (00:03:11) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 0.3942 | |
2 | I | A | 0.6518 | |
3 | I | A | 0.1332 | |
4 | T | A | -0.1280 | |
5 | V | A | -0.1077 | |
6 | T | A | -0.5592 | |
7 | P | A | -1.1337 | |
8 | K | A | -1.7061 | |
9 | S | A | -0.7142 | |
10 | F | A | 0.8340 | |
11 | G | A | -0.0442 | |
12 | S | A | -0.1379 | |
13 | P | A | -0.3536 | |
14 | G | A | -0.8342 | |
15 | S | A | -0.9355 | |
16 | L | A | -0.4675 | |
17 | G | A | 0.0000 | |
18 | K | A | -0.8318 | |
19 | L | A | 0.0000 | |
20 | L | A | -0.6029 | |
21 | C | A | 0.0000 | |
22 | E | A | -1.1885 | |
23 | V | A | -0.0437 | |
24 | T | A | 0.2227 | |
25 | P | A | 0.5059 | |
26 | V | A | 1.0831 | |
27 | S | A | -0.0312 | |
28 | G | A | -0.8711 | |
29 | Q | A | -1.6833 | |
30 | E | A | -1.4701 | |
31 | R | A | -1.9571 | |
32 | F | A | -0.4526 | |
33 | V | A | -0.1996 | |
34 | W | A | 0.0000 | |
35 | S | A | -0.3267 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0952 | |
38 | D | A | -1.6050 | |
39 | T | A | -0.9755 | |
40 | P | A | -0.7217 | |
41 | S | A | -0.2650 | |
42 | Q | A | -0.3578 | |
43 | R | A | 0.0000 | |
44 | S | A | 0.0000 | |
45 | F | A | 0.0000 | |
46 | S | A | -0.2813 | |
47 | G | A | -0.2604 | |
48 | P | A | -0.3199 | |
49 | W | A | 0.0741 | |
50 | L | A | 0.0000 | |
51 | E | A | -0.5685 | |
52 | A | A | -1.1240 | |
53 | Q | A | 0.0000 | |
54 | E | A | -2.1115 | |
55 | A | A | -1.2252 | |
56 | Q | A | -1.2062 | |
57 | L | A | -0.2635 | |
58 | L | A | 0.9727 | |
59 | S | A | -0.0039 | |
60 | Q | A | -0.4182 | |
61 | P | A | 0.0000 | |
62 | W | A | 0.0000 | |
63 | Q | A | 0.3754 | |
64 | C | A | 0.0000 | |
65 | Q | A | 0.1239 | |
66 | L | A | 0.0000 | |
67 | Y | A | -0.9662 | |
68 | Q | A | -1.6127 | |
69 | G | A | -2.0656 | |
70 | E | A | -2.8978 | |
71 | R | A | -2.1577 | |
72 | L | A | 0.0881 | |
73 | L | A | 0.8129 | |
74 | G | A | 0.4647 | |
75 | A | A | 0.5271 | |
76 | A | A | 0.5043 | |
77 | V | A | 1.3144 | |
78 | Y | A | 1.4683 | |
79 | F | A | 2.0682 | |
80 | T | A | 0.9410 | |
81 | E | A | -0.5182 | |
82 | L | A | 1.1070 | |
83 | Q | H | -1.4709 | |
84 | V | H | -0.7788 | |
85 | Q | H | -1.2560 | |
86 | L | H | 0.0000 | |
87 | V | H | 0.3654 | |
88 | Q | H | 0.0000 | |
89 | S | H | -0.4685 | |
90 | G | H | -0.5693 | |
91 | A | H | 0.0195 | |
92 | E | H | 0.1306 | |
93 | V | H | 0.9620 | |
94 | K | H | -0.8757 | |
95 | K | H | -2.0793 | |
96 | P | H | -1.8635 | |
97 | G | H | -1.4489 | |
98 | A | H | -1.1709 | |
99 | S | H | -1.1466 | |
100 | V | H | 0.0000 | |
101 | K | H | -1.4290 | |
102 | V | H | 0.0000 | |
103 | S | H | -0.3664 | |
104 | C | H | 0.0000 | |
105 | K | H | -0.6012 | |
106 | A | H | -0.3559 | |
107 | S | H | -0.7557 | |
108 | G | H | -1.0022 | |
109 | F | H | -0.3039 | |
110 | T | H | -0.0102 | |
111 | L | H | 0.0000 | |
112 | T | H | -0.5143 | |
113 | N | H | -0.8257 | |
114 | Y | H | 0.1489 | |
115 | G | H | 0.0000 | |
116 | M | H | 0.0000 | |
117 | N | H | 0.0000 | |
118 | W | H | 0.0000 | |
119 | V | H | 0.0000 | |
120 | R | H | -0.4207 | |
121 | Q | H | -0.9325 | |
122 | A | H | -1.5773 | |
123 | R | H | -2.4176 | |
124 | G | H | -2.0259 | |
125 | Q | H | -1.6049 | |
126 | R | H | -1.0190 | |
127 | L | H | 0.0000 | |
128 | E | H | -0.6350 | |
129 | W | H | 0.0000 | |
130 | I | H | 0.0000 | |
131 | G | H | 0.0000 | |
132 | W | H | 0.0000 | |
133 | I | H | 0.0000 | |
134 | N | H | 0.0000 | |
135 | T | H | -1.1093 | |
136 | D | H | -2.1435 | |
137 | T | H | -1.2580 | |
138 | G | H | -1.5480 | |
139 | E | H | -1.9159 | |
140 | P | H | -0.6252 | |
141 | T | H | 0.0000 | |
142 | Y | H | -1.0449 | |
143 | A | H | 0.0000 | |
144 | D | H | -3.2802 | |
145 | D | H | -3.2326 | |
146 | F | H | 0.0000 | |
147 | K | H | -2.7180 | |
148 | G | H | -1.7496 | |
149 | R | H | -1.3318 | |
150 | F | H | 0.0000 | |
151 | V | H | -0.0629 | |
152 | F | H | 0.0000 | |
153 | S | H | -0.0516 | |
154 | L | H | 0.1512 | |
155 | D | H | -0.6508 | |
156 | T | H | -0.3053 | |
157 | S | H | 0.0161 | |
158 | V | H | 0.5464 | |
159 | S | H | -0.1532 | |
160 | T | H | 0.0000 | |
161 | A | H | 0.0000 | |
162 | Y | H | -0.2846 | |
163 | L | H | 0.0000 | |
164 | Q | H | -0.9396 | |
165 | I | H | 0.0000 | |
166 | S | H | -0.8433 | |
167 | S | H | -1.0464 | |
168 | L | H | 0.0000 | |
169 | K | H | -2.4643 | |
170 | A | H | -1.8648 | |
171 | E | H | -2.2505 | |
172 | D | H | 0.0000 | |
173 | T | H | -0.9578 | |
174 | A | H | 0.0000 | |
175 | V | H | -0.2371 | |
176 | Y | H | 0.0000 | |
177 | Y | H | 0.0000 | |
178 | C | H | 0.0000 | |
179 | A | H | 0.0000 | |
180 | R | H | 0.0000 | |
181 | N | H | -0.1837 | |
182 | P | H | 0.2442 | |
183 | P | H | 0.7518 | |
184 | Y | H | 1.9070 | |
185 | Y | H | 2.1404 | |
186 | Y | H | 1.5297 | |
187 | G | H | 0.6977 | |
188 | T | H | -0.3597 | |
189 | N | H | 0.0000 | |
190 | Y | H | -0.0873 | |
191 | A | H | 0.0000 | |
192 | E | H | -1.6220 | |
193 | A | H | -0.7816 | |
194 | M | H | 0.0000 | |
195 | D | H | -0.4667 | |
196 | Y | H | -0.1476 | |
197 | W | H | -0.2904 | |
198 | G | H | 0.0000 | |
199 | Q | H | -1.4333 | |
200 | G | H | -0.7224 | |
201 | T | H | 0.0000 | |
202 | T | H | 0.0235 | |
203 | V | H | 0.0000 | |
204 | T | H | -0.2860 | |
205 | V | H | 0.0000 | |
206 | S | H | -0.8339 | |
207 | S | H | -0.8375 | |
208 | D | L | -1.4270 | |
209 | I | L | 0.2065 | |
210 | Q | L | -0.7250 | |
211 | M | L | 0.0079 | |
212 | T | L | 0.0000 | |
213 | Q | L | 0.0000 | |
214 | S | L | -0.3602 | |
215 | P | L | -0.6650 | |
216 | S | L | -0.9366 | |
217 | S | L | -1.1480 | |
218 | L | L | -0.8254 | |
219 | S | L | -1.1781 | |
220 | A | L | 0.0000 | |
221 | S | L | -1.0177 | |
222 | V | L | -0.2013 | |
223 | G | L | -0.9640 | |
224 | D | L | -1.9774 | |
225 | R | L | -2.3989 | |
226 | V | L | 0.0000 | |
227 | T | L | -0.5041 | |
228 | I | L | 0.0000 | |
229 | T | L | -0.5421 | |
230 | C | L | 0.0000 | |
231 | S | L | -1.3915 | |
232 | S | L | -1.5572 | |
233 | S | L | -1.1522 | |
234 | Q | L | -1.8869 | |
235 | D | L | -2.6782 | |
236 | I | L | -0.8121 | |
237 | S | L | -1.1754 | |
238 | N | L | -0.7996 | |
239 | Y | L | 0.3903 | |
240 | L | L | 0.0000 | |
241 | N | L | 0.0000 | |
242 | W | L | 0.0000 | |
243 | Y | L | 0.0000 | |
244 | L | L | -0.4031 | |
245 | Q | L | -0.9467 | |
246 | K | L | -1.2358 | |
247 | P | L | -1.0003 | |
248 | G | L | -1.3966 | |
249 | Q | L | -2.0555 | |
250 | S | L | -1.4271 | |
251 | P | L | 0.0000 | |
252 | Q | L | -1.3697 | |
253 | L | L | 0.0000 | |
254 | L | L | 0.0000 | |
255 | I | L | 0.0000 | |
256 | Y | L | 0.7205 | |
257 | Y | L | 0.8100 | |
258 | T | L | 0.0000 | |
259 | S | L | -0.0699 | |
260 | T | L | 0.5034 | |
261 | L | L | 0.8272 | |
262 | H | L | 0.5992 | |
263 | L | L | 1.4246 | |
264 | G | L | 0.4227 | |
265 | V | L | 0.4186 | |
266 | P | L | -0.1480 | |
267 | S | L | -0.4660 | |
268 | R | L | -0.9778 | |
269 | F | L | 0.0000 | |
270 | S | L | -0.3840 | |
271 | G | L | -0.1708 | |
272 | S | L | -0.7976 | |
273 | G | L | -1.2566 | |
274 | S | L | -1.3642 | |
275 | G | L | -1.6245 | |
276 | T | L | -2.0813 | |
277 | E | L | -2.4720 | |
278 | F | L | 0.0000 | |
279 | T | L | -0.6767 | |
280 | L | L | 0.0000 | |
281 | T | L | -0.6580 | |
282 | I | L | 0.0000 | |
283 | S | L | -1.5730 | |
284 | S | L | -1.4111 | |
285 | L | L | 0.0000 | |
286 | Q | L | -1.0525 | |
287 | P | L | -0.9907 | |
288 | D | L | -1.6239 | |
289 | D | L | 0.0000 | |
290 | F | L | -0.4857 | |
291 | A | L | 0.0000 | |
292 | T | L | 0.0000 | |
293 | Y | L | 0.0000 | |
294 | Y | L | 0.0000 | |
295 | C | L | 0.0000 | |
296 | Q | L | 0.0000 | |
297 | Q | L | 0.0000 | |
298 | Y | L | 0.0000 | |
299 | Y | L | 0.1530 | |
300 | N | L | -0.3923 | |
301 | L | L | 0.0000 | |
302 | P | L | -0.4567 | |
303 | W | L | 0.0000 | |
304 | T | L | 0.1694 | |
305 | F | L | 0.0000 | |
306 | G | L | 0.0000 | |
307 | Q | L | -0.8756 | |
308 | G | L | 0.0000 | |
309 | T | L | 0.0000 | |
310 | K | L | -2.0907 | |
311 | V | L | 0.0000 | |
312 | E | L | -2.0169 | |
313 | I | L | -1.0518 | |
314 | K | L | -1.7330 |