| Chain sequence(s) |
H: QVQLQESGPGLVRPSQTLSLTCTVSGFTFTDFYMNWVRQPPGRGLEWIGFIRDKAKGYTTEYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREGHTAAPFDYWGQGSLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASQNIDKYLNWYQQKPGKAPKLLIYNTNNLQTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQHISRPRTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:16)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3840 | |
| 2 | V | H | -0.6383 | |
| 3 | Q | H | -1.2798 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.2463 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.7245 | |
| 8 | G | H | -0.4789 | |
| 9 | P | H | -0.0812 | |
| 10 | G | H | 0.2847 | |
| 11 | L | H | 0.6446 | |
| 12 | V | H | 0.0000 | |
| 13 | R | H | -2.1479 | |
| 14 | P | H | -1.5002 | |
| 15 | S | H | -1.4508 | |
| 16 | Q | H | -1.9982 | |
| 17 | T | H | -1.4668 | |
| 18 | L | H | 0.0000 | |
| 19 | S | H | -0.9893 | |
| 20 | L | H | 0.0000 | |
| 21 | T | H | -0.5140 | |
| 22 | C | H | 0.0000 | |
| 23 | T | H | -1.1139 | |
| 24 | V | H | 0.0000 | |
| 25 | S | H | -1.1310 | |
| 26 | G | H | -0.9451 | |
| 27 | F | H | -0.3794 | |
| 28 | T | H | -0.2523 | |
| 29 | F | H | 0.0000 | |
| 30 | T | H | -1.0452 | |
| 31 | D | H | -1.1980 | |
| 32 | F | H | -0.3894 | |
| 33 | Y | H | -0.3661 | |
| 34 | M | H | 0.0000 | |
| 35 | N | H | 0.0000 | |
| 36 | W | H | 0.0000 | |
| 37 | V | H | 0.0000 | |
| 38 | R | H | 0.0000 | |
| 39 | Q | H | -0.6783 | |
| 40 | P | H | -0.8178 | |
| 41 | P | H | -0.9445 | |
| 42 | G | H | -1.5166 | |
| 43 | R | H | -2.4588 | |
| 44 | G | H | -1.5876 | |
| 45 | L | H | 0.0000 | |
| 46 | E | H | -0.7804 | |
| 47 | W | H | 0.0000 | |
| 48 | I | H | 0.0000 | |
| 49 | G | H | 0.0000 | |
| 50 | F | H | 0.0000 | |
| 51 | I | H | 0.0000 | |
| 52 | R | H | -1.0325 | |
| 53 | D | H | -1.5776 | |
| 54 | K | H | -2.4116 | |
| 55 | A | H | -1.6837 | |
| 56 | K | H | -2.1704 | |
| 57 | G | H | -1.6530 | |
| 58 | Y | H | -0.9731 | |
| 59 | T | H | -0.7554 | |
| 60 | T | H | -0.2986 | |
| 61 | E | H | -0.7718 | |
| 62 | Y | H | -0.9027 | |
| 63 | N | H | 0.0000 | |
| 64 | P | H | -1.5193 | |
| 65 | S | H | -0.9294 | |
| 66 | V | H | 0.0000 | |
| 67 | K | H | -2.1930 | |
| 68 | G | H | -1.5571 | |
| 69 | R | H | -1.5021 | |
| 70 | V | H | 0.0000 | |
| 71 | T | H | -0.8288 | |
| 72 | M | H | 0.0000 | |
| 73 | L | H | 0.2461 | |
| 74 | V | H | -0.1623 | |
| 75 | D | H | -1.2280 | |
| 76 | T | H | -1.3851 | |
| 77 | S | H | -1.4107 | |
| 78 | K | H | -2.3690 | |
| 79 | N | H | -1.8138 | |
| 80 | Q | H | -1.3857 | |
| 81 | F | H | 0.0000 | |
| 82 | S | H | -0.3477 | |
| 83 | L | H | 0.0000 | |
| 84 | R | H | -1.3686 | |
| 85 | L | H | 0.0000 | |
| 86 | S | H | -1.1686 | |
| 87 | S | H | -1.1233 | |
| 88 | V | H | 0.0000 | |
| 89 | T | H | -0.6014 | |
| 90 | A | H | -0.2542 | |
| 91 | A | H | 0.0587 | |
| 92 | D | H | 0.0000 | |
| 93 | T | H | 0.2542 | |
| 94 | A | H | 0.0000 | |
| 95 | V | H | 0.4213 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.0000 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.0000 | |
| 100 | R | H | 0.0590 | |
| 101 | E | H | 0.0000 | |
| 102 | G | H | 0.0000 | |
| 103 | H | H | -0.6623 | |
| 104 | T | H | -0.3856 | |
| 105 | A | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | P | H | 0.0000 | |
| 108 | F | H | 0.0000 | |
| 109 | D | H | -0.0903 | |
| 110 | Y | H | 0.3379 | |
| 111 | W | H | -0.4064 | |
| 112 | G | H | 0.0000 | |
| 113 | Q | H | -1.6767 | |
| 114 | G | H | 0.0000 | |
| 115 | S | H | -0.1124 | |
| 116 | L | H | 0.7452 | |
| 117 | V | H | 0.0000 | |
| 118 | T | H | 0.2350 | |
| 119 | V | H | 0.0000 | |
| 120 | S | H | -0.5955 | |
| 121 | S | H | -0.7755 | |
| 1 | D | L | -2.6533 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.2011 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -1.3474 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6659 | |
| 8 | P | L | -0.4881 | |
| 9 | S | L | -0.7842 | |
| 10 | S | L | -0.9565 | |
| 11 | L | L | -0.8061 | |
| 12 | S | L | -1.2145 | |
| 13 | A | L | -1.1521 | |
| 14 | S | L | -0.7806 | |
| 15 | V | L | 0.3019 | |
| 16 | G | L | -0.7376 | |
| 17 | D | L | -1.8594 | |
| 18 | R | L | -2.3398 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6641 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.8737 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.6959 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -2.1564 | |
| 27 | Q | L | -2.8205 | |
| 28 | N | L | -2.6030 | |
| 29 | I | L | 0.0000 | |
| 30 | D | L | -2.1661 | |
| 31 | K | L | -2.2429 | |
| 32 | Y | L | -0.6668 | |
| 33 | L | L | 0.0000 | |
| 34 | N | L | 0.0000 | |
| 35 | W | L | 0.0000 | |
| 36 | Y | L | 0.0000 | |
| 37 | Q | L | 0.0000 | |
| 38 | Q | L | -1.2586 | |
| 39 | K | L | -1.6720 | |
| 40 | P | L | -1.1949 | |
| 41 | G | L | -1.7176 | |
| 42 | K | L | -2.6178 | |
| 43 | A | L | -1.5434 | |
| 44 | P | L | 0.0000 | |
| 45 | K | L | -1.2919 | |
| 46 | L | L | 0.0000 | |
| 47 | L | L | 0.0000 | |
| 48 | I | L | 0.0000 | |
| 49 | Y | L | -0.3878 | |
| 50 | N | L | -0.9198 | |
| 51 | T | L | 0.0000 | |
| 52 | N | L | -1.6931 | |
| 53 | N | L | -0.8368 | |
| 54 | L | L | -0.1619 | |
| 55 | Q | L | -0.3921 | |
| 56 | T | L | -0.2711 | |
| 57 | G | L | -0.4442 | |
| 58 | V | L | -0.2775 | |
| 59 | P | L | -0.3152 | |
| 60 | S | L | -0.3846 | |
| 61 | R | L | -0.7920 | |
| 62 | F | L | 0.0000 | |
| 63 | S | L | -0.6097 | |
| 64 | G | L | -0.8071 | |
| 65 | S | L | -1.3629 | |
| 66 | G | L | -1.8726 | |
| 67 | S | L | -1.9758 | |
| 68 | G | L | -2.2850 | |
| 69 | T | L | -2.5649 | |
| 70 | D | L | -3.1002 | |
| 71 | F | L | 0.0000 | |
| 72 | T | L | -0.9842 | |
| 73 | F | L | 0.0000 | |
| 74 | T | L | 0.0000 | |
| 75 | I | L | 0.0000 | |
| 76 | S | L | -1.4863 | |
| 77 | S | L | -1.2841 | |
| 78 | L | L | 0.0000 | |
| 79 | Q | L | -0.6758 | |
| 80 | P | L | -0.8665 | |
| 81 | E | L | -1.2283 | |
| 82 | D | L | 0.0000 | |
| 83 | I | L | -0.3851 | |
| 84 | A | L | 0.0000 | |
| 85 | T | L | -0.8273 | |
| 86 | Y | L | 0.0000 | |
| 87 | Y | L | 0.0000 | |
| 88 | C | L | 0.0000 | |
| 89 | L | L | 0.0000 | |
| 90 | Q | L | 0.0000 | |
| 91 | H | L | -0.1810 | |
| 92 | I | L | 0.0339 | |
| 93 | S | L | -0.8390 | |
| 94 | R | L | -2.1020 | |
| 95 | P | L | 0.0000 | |
| 96 | R | L | 0.0000 | |
| 97 | T | L | -1.0107 | |
| 98 | F | L | 0.0000 | |
| 99 | G | L | 0.0000 | |
| 100 | Q | L | -1.6281 | |
| 101 | G | L | 0.0000 | |
| 102 | T | L | 0.0000 | |
| 103 | K | L | -1.4135 | |
| 104 | V | L | 0.0000 | |
| 105 | E | L | -1.7631 | |
| 106 | I | L | -0.8762 | |
| 107 | K | L | -1.6435 |