Project name: 5035daad835226c

Status: done

Started: 2026-05-22 15:55:40
Settings
Chain sequence(s) H: QVQLQESGPGLVRPSQTLSLTCTVSGFTFTDFYMNWVRQPPGRGLEWIGFIRDKAKGYTTEYNPSVKGRVTMLVDTSKNQFSLRLSSVTAADTAVYYCAREGHTAAPFDYWGQGSLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCKASQNIDKYLNWYQQKPGKAPKLLIYNTNNLQTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQHISRPRTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:18)
Show buried residues

Minimal score value
-3.1002
Maximal score value
0.7452
Average score
-0.6877
Total score value
-156.7865

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.3840
2 V H -0.6383
3 Q H -1.2798
4 L H 0.0000
5 Q H -1.2463
6 E H 0.0000
7 S H -0.7245
8 G H -0.4789
9 P H -0.0812
10 G H 0.2847
11 L H 0.6446
12 V H 0.0000
13 R H -2.1479
14 P H -1.5002
15 S H -1.4508
16 Q H -1.9982
17 T H -1.4668
18 L H 0.0000
19 S H -0.9893
20 L H 0.0000
21 T H -0.5140
22 C H 0.0000
23 T H -1.1139
24 V H 0.0000
25 S H -1.1310
26 G H -0.9451
27 F H -0.3794
28 T H -0.2523
29 F H 0.0000
30 T H -1.0452
31 D H -1.1980
32 F H -0.3894
33 Y H -0.3661
34 M H 0.0000
35 N H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.6783
40 P H -0.8178
41 P H -0.9445
42 G H -1.5166
43 R H -2.4588
44 G H -1.5876
45 L H 0.0000
46 E H -0.7804
47 W H 0.0000
48 I H 0.0000
49 G H 0.0000
50 F H 0.0000
51 I H 0.0000
52 R H -1.0325
53 D H -1.5776
54 K H -2.4116
55 A H -1.6837
56 K H -2.1704
57 G H -1.6530
58 Y H -0.9731
59 T H -0.7554
60 T H -0.2986
61 E H -0.7718
62 Y H -0.9027
63 N H 0.0000
64 P H -1.5193
65 S H -0.9294
66 V H 0.0000
67 K H -2.1930
68 G H -1.5571
69 R H -1.5021
70 V H 0.0000
71 T H -0.8288
72 M H 0.0000
73 L H 0.2461
74 V H -0.1623
75 D H -1.2280
76 T H -1.3851
77 S H -1.4107
78 K H -2.3690
79 N H -1.8138
80 Q H -1.3857
81 F H 0.0000
82 S H -0.3477
83 L H 0.0000
84 R H -1.3686
85 L H 0.0000
86 S H -1.1686
87 S H -1.1233
88 V H 0.0000
89 T H -0.6014
90 A H -0.2542
91 A H 0.0587
92 D H 0.0000
93 T H 0.2542
94 A H 0.0000
95 V H 0.4213
96 Y H 0.0000
97 Y H 0.0000
98 C H 0.0000
99 A H 0.0000
100 R H 0.0590
101 E H 0.0000
102 G H 0.0000
103 H H -0.6623
104 T H -0.3856
105 A H 0.0000
106 A H 0.0000
107 P H 0.0000
108 F H 0.0000
109 D H -0.0903
110 Y H 0.3379
111 W H -0.4064
112 G H 0.0000
113 Q H -1.6767
114 G H 0.0000
115 S H -0.1124
116 L H 0.7452
117 V H 0.0000
118 T H 0.2350
119 V H 0.0000
120 S H -0.5955
121 S H -0.7755
1 D L -2.6533
2 I L 0.0000
3 Q L -2.2011
4 M L 0.0000
5 T L -1.3474
6 Q L 0.0000
7 S L -0.6659
8 P L -0.4881
9 S L -0.7842
10 S L -0.9565
11 L L -0.8061
12 S L -1.2145
13 A L -1.1521
14 S L -0.7806
15 V L 0.3019
16 G L -0.7376
17 D L -1.8594
18 R L -2.3398
19 V L 0.0000
20 T L -0.6641
21 I L 0.0000
22 T L -0.8737
23 C L 0.0000
24 K L -2.6959
25 A L 0.0000
26 S L -2.1564
27 Q L -2.8205
28 N L -2.6030
29 I L 0.0000
30 D L -2.1661
31 K L -2.2429
32 Y L -0.6668
33 L L 0.0000
34 N L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L -1.2586
39 K L -1.6720
40 P L -1.1949
41 G L -1.7176
42 K L -2.6178
43 A L -1.5434
44 P L 0.0000
45 K L -1.2919
46 L L 0.0000
47 L L 0.0000
48 I L 0.0000
49 Y L -0.3878
50 N L -0.9198
51 T L 0.0000
52 N L -1.6931
53 N L -0.8368
54 L L -0.1619
55 Q L -0.3921
56 T L -0.2711
57 G L -0.4442
58 V L -0.2775
59 P L -0.3152
60 S L -0.3846
61 R L -0.7920
62 F L 0.0000
63 S L -0.6097
64 G L -0.8071
65 S L -1.3629
66 G L -1.8726
67 S L -1.9758
68 G L -2.2850
69 T L -2.5649
70 D L -3.1002
71 F L 0.0000
72 T L -0.9842
73 F L 0.0000
74 T L 0.0000
75 I L 0.0000
76 S L -1.4863
77 S L -1.2841
78 L L 0.0000
79 Q L -0.6758
80 P L -0.8665
81 E L -1.2283
82 D L 0.0000
83 I L -0.3851
84 A L 0.0000
85 T L -0.8273
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 L L 0.0000
90 Q L 0.0000
91 H L -0.1810
92 I L 0.0339
93 S L -0.8390
94 R L -2.1020
95 P L 0.0000
96 R L 0.0000
97 T L -1.0107
98 F L 0.0000
99 G L 0.0000
100 Q L -1.6281
101 G L 0.0000
102 T L 0.0000
103 K L -1.4135
104 V L 0.0000
105 E L -1.7631
106 I L -0.8762
107 K L -1.6435
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Laboratory of Theory of Biopolymers 2018