Project name: KKGHKGH12

Status: done

Started: 2026-05-21 12:36:28
Settings
Chain sequence(s) A: KKGHKGH
C: KKGHKGH
B: KKGHKGH
E: KKGHKGH
D: KKGHKGH
G: KKGHKGH
F: KKGHKGH
I: KKGHKGH
H: KKGHKGH
K: KKGHKGH
J: KKGHKGH
L: KKGHKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:17)
Show buried residues

Minimal score value
-4.7471
Maximal score value
-1.8041
Average score
-3.4028
Total score value
-285.8366

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.9968
2 K A -3.9594
3 G A -3.3555
4 H A -3.3705
5 K A -3.5688
6 G A -2.5381
7 H A -2.0411
1 K B -3.5238
2 K B -3.9474
3 G B -3.4263
4 H B -3.3794
5 K B -3.2848
6 G B -2.4652
7 H B -1.9293
1 K C -3.0127
2 K C -4.3580
3 G C -3.8381
4 H C -3.5368
5 K C -4.1179
6 G C -2.4424
7 H C -3.0127
1 K D -2.7266
2 K D -3.3054
3 G D -2.6650
4 H D -3.1892
5 K D -3.2940
6 G D -2.7871
7 H D -3.0968
1 K E -2.8206
2 K E -3.2777
3 G E -3.1558
4 H E -3.9671
5 K E -4.3533
6 G E -3.6252
7 H E -3.5684
1 K F -4.0559
2 K F -4.7471
3 G F -3.2711
4 H F -3.9098
5 K F -3.6111
6 G F -2.7085
7 H F -2.9097
1 K G -3.6619
2 K G -4.1006
3 G G -3.7723
4 H G -3.7543
5 K G -4.4601
6 G G -3.3154
7 H G -2.6177
1 K H -3.6091
2 K H -3.9575
3 G H -3.8112
4 H H -3.2890
5 K H -3.6665
6 G H -2.4682
7 H H -2.5669
1 K I -3.5842
2 K I -3.7961
3 G I -3.8710
4 H I -3.4260
5 K I -4.1600
6 G I -2.7458
7 H I -2.7171
1 K J -3.1040
2 K J -3.4697
3 G J -3.7790
4 H J -3.8998
5 K J -4.1026
6 G J -3.3456
7 H J -3.1865
1 K K -3.8662
2 K K -4.0211
3 G K -3.7598
4 H K -3.2096
5 K K -3.4664
6 G K -2.9362
7 H K -3.9910
1 K L -3.6981
2 K L -4.2280
3 G L -4.0136
4 H L -3.9273
5 K L -3.4203
6 G L -2.1064
7 H L -1.8041
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Laboratory of Theory of Biopolymers 2018